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CAZyme Information: MGYG000002774_00498

You are here: Home > Sequence: MGYG000002774_00498

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Schleiferilactobacillus harbinensis
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Schleiferilactobacillus; Schleiferilactobacillus harbinensis
CAZyme ID MGYG000002774_00498
CAZy Family GH50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
658 MGYG000002774_2|CGC3 72770.18 4.7775
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002774 3078759 MAG United States North America
Gene Location Start: 36801;  End: 38777  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002774_00498.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH50 119 633 5.9e-119 0.8330781010719756

CDD Domains      help

MGYG000002774_00498 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QFR63110.1 0.0 1 658 1 658
QFR24656.1 0.0 1 658 1 658
QEU47593.1 0.0 1 658 1 658
QGG55910.1 1.08e-182 31 658 31 669
AZP03585.1 6.69e-170 25 658 25 669

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5Z6P_A 2.28e-64 161 629 222 752
Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]
4BQ2_A 6.45e-59 121 630 163 737
Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A 1.67e-58 121 630 163 737
Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
6XJ9_A 2.51e-57 159 629 220 752
Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P48840 9.17e-62 152 630 419 943
Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1
P48839 3.05e-44 161 630 398 907
Beta-agarase A OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.998594 0.001332 0.000070 0.000006 0.000002 0.000014

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002774_00498.