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CAZyme Information: MGYG000002777_00300

You are here: Home > Sequence: MGYG000002777_00300

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Dialister sp900545785
Lineage Bacteria; Firmicutes_C; Negativicutes; Veillonellales; Dialisteraceae; Dialister; Dialister sp900545785
CAZyme ID MGYG000002777_00300
CAZy Family GT19
CAZyme Description Lipid-A-disaccharide synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
379 MGYG000002777_10|CGC1 42179.43 7.3242
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002777 1462546 MAG United States North America
Gene Location Start: 9859;  End: 10998  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002777_00300.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT19 3 357 3.1e-125 0.9915254237288136

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK00025 lpxB 3.15e-144 1 372 2 373
lipid-A-disaccharide synthase; Reviewed
COG0763 LpxB 2.02e-121 1 374 2 379
Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis].
pfam02684 LpxB 1.04e-91 3 330 1 332
Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide.
TIGR00215 lpxB 1.97e-83 3 371 8 383
lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
PRK14089 PRK14089 3.63e-60 1 372 2 346
lipid-A-disaccharide synthase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AOH38760.1 2.26e-176 1 378 1 378
BBK24321.1 1.35e-175 1 376 1 376
ARF98938.1 5.66e-141 1 370 1 370
BBU36764.1 3.74e-139 1 376 1 376
BBU34833.1 3.74e-139 1 376 1 376

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5W8S_A 2.71e-53 3 330 9 338
LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)]
5W8N_A 5.34e-53 3 330 9 338
LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q39T49 1.34e-105 2 376 8 382
Lipid-A-disaccharide synthase OS=Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15) OX=269799 GN=lpxB PE=3 SV=1
Q74AT9 1.53e-104 2 376 8 382
Lipid-A-disaccharide synthase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=lpxB PE=3 SV=1
B3E4H8 9.91e-100 2 371 8 377
Lipid-A-disaccharide synthase OS=Trichlorobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) OX=398767 GN=lpxB PE=3 SV=1
Q2LVL8 3.84e-88 3 371 6 375
Lipid-A-disaccharide synthase OS=Syntrophus aciditrophicus (strain SB) OX=56780 GN=lpxB PE=3 SV=1
B6J161 1.24e-87 3 370 6 370
Lipid-A-disaccharide synthase OS=Coxiella burnetii (strain CbuG_Q212) OX=434923 GN=lpxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999921 0.000110 0.000006 0.000000 0.000000 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002777_00300.