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CAZyme Information: MGYG000002787_01727
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lactiplantibacillus pentosus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactiplantibacillus; Lactiplantibacillus pentosus | |||||||||||
| CAZyme ID | MGYG000002787_01727 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 47949; End: 49427 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00877 | NLPC_P60 | 1.42e-25 | 390 | 484 | 3 | 96 | NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins. |
| COG0791 | Spr | 1.12e-19 | 390 | 476 | 89 | 179 | Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis]. |
| PRK06347 | PRK06347 | 2.76e-13 | 23 | 140 | 472 | 591 | 1,4-beta-N-acetylmuramoylhydrolase. |
| pfam01476 | LysM | 1.19e-12 | 101 | 141 | 3 | 43 | LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known. |
| PRK06347 | PRK06347 | 2.06e-12 | 24 | 140 | 324 | 449 | 1,4-beta-N-acetylmuramoylhydrolase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BBM23106.1 | 4.44e-162 | 1 | 492 | 1 | 492 |
| AYJ42244.1 | 4.44e-162 | 1 | 492 | 1 | 492 |
| ASG81007.1 | 4.44e-162 | 1 | 492 | 1 | 492 |
| AUI78398.1 | 2.05e-160 | 1 | 492 | 1 | 492 |
| AYG37698.1 | 5.16e-155 | 1 | 492 | 1 | 489 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6B8C_A | 1.20e-25 | 375 | 488 | 24 | 139 | Crystalstructure of NlpC/p60 domain of peptidoglycan hydrolase SagA [Enterococcus faecium] |
| 2K1G_A | 3.34e-10 | 389 | 469 | 19 | 99 | SolutionNMR structure of lipoprotein spr from Escherichia coli K12. Northeast Structural Genomics target ER541-37-162 [Escherichia coli K-12] |
| 4Q4T_A | 7.29e-10 | 384 | 487 | 351 | 465 | Structureof the Resuscitation Promoting Factor Interacting protein RipA mutated at E444 [Mycobacterium tuberculosis H37Rv] |
| 2HBW_A | 2.21e-07 | 391 | 465 | 115 | 188 | ChainA, NLP/P60 protein [Trichormus variabilis ATCC 29413] |
| 3I86_A | 8.49e-07 | 389 | 487 | 25 | 134 | Crystalstructure of the P60 Domain from M. avium subspecies paratuberculosis antigen MAP1204 [Mycobacterium avium subsp. paratuberculosis],3I86_B Crystal structure of the P60 Domain from M. avium subspecies paratuberculosis antigen MAP1204 [Mycobacterium avium subsp. paratuberculosis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P13692 | 9.21e-23 | 375 | 488 | 398 | 513 | Protein P54 OS=Enterococcus faecium OX=1352 PE=3 SV=2 |
| P54421 | 2.27e-17 | 27 | 145 | 22 | 134 | Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1 |
| Q8CMN2 | 3.65e-17 | 22 | 150 | 18 | 138 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=sle1 PE=3 SV=1 |
| Q5HRU2 | 3.65e-17 | 22 | 150 | 18 | 138 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=sle1 PE=3 SV=1 |
| Q5HIL2 | 2.46e-16 | 9 | 149 | 4 | 143 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus (strain COL) OX=93062 GN=sle1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000311 | 0.998978 | 0.000169 | 0.000199 | 0.000177 | 0.000156 |