logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002808_01043

You are here: Home > Sequence: MGYG000002808_01043

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella;
CAZyme ID MGYG000002808_01043
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
728 78764.73 4.5542
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002808 1514881 MAG Peru South America
Gene Location Start: 925;  End: 3111  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002808_01043.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 56 721 2.2e-56 0.8228155339805825

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 1.04e-05 273 489 579 800
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54541.1 0.0 1 728 130 855
AZH68834.1 0.0 10 723 145 863
QNM10672.1 1.37e-233 32 722 161 833
AGF57028.1 6.33e-184 32 721 160 845
AZS14314.1 4.17e-156 10 721 158 872

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000063 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002808_01043.