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CAZyme Information: MGYG000002814_00359
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA3631 sp900544605 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; RF39; UBA660; UBA3631; UBA3631 sp900544605 | |||||||||||
| CAZyme ID | MGYG000002814_00359 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | Peptidoglycan endopeptidase LytF | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 15142; End: 15639 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM50 | 21 | 63 | 1.5e-17 | 0.975 |
| CBM50 | 74 | 116 | 1.7e-17 | 0.975 |
| CBM50 | 124 | 165 | 1.9e-16 | 0.95 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK06347 | PRK06347 | 3.49e-27 | 10 | 165 | 397 | 591 | 1,4-beta-N-acetylmuramoylhydrolase. |
| PRK10783 | mltD | 1.82e-20 | 12 | 160 | 337 | 441 | membrane-bound lytic murein transglycosylase D; Provisional |
| PRK06347 | PRK06347 | 4.72e-19 | 20 | 163 | 332 | 521 | 1,4-beta-N-acetylmuramoylhydrolase. |
| pfam01476 | LysM | 1.48e-15 | 21 | 63 | 1 | 43 | LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known. |
| pfam01476 | LysM | 1.89e-14 | 124 | 165 | 1 | 42 | LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ANU13868.1 | 5.84e-25 | 3 | 116 | 278 | 397 |
| QMT16625.1 | 1.52e-23 | 19 | 116 | 237 | 340 |
| ANU17773.1 | 2.91e-23 | 21 | 116 | 239 | 340 |
| QHA94197.1 | 4.36e-23 | 21 | 116 | 13 | 108 |
| AMA62340.1 | 5.32e-23 | 19 | 115 | 99 | 217 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4B8V_A | 9.46e-11 | 19 | 116 | 115 | 217 | ChainA, Extracellular Protein 6 [Fulvia fulva],4B9H_A Chain A, Extracellular Protein 6 [Fulvia fulva] |
| 4UZ2_A | 1.11e-10 | 18 | 63 | 2 | 47 | Crystalstructure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_B Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_C Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_D Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ3_A Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8],4UZ3_B Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8],4UZ3_C Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8] |
| 4XCM_A | 6.92e-09 | 18 | 63 | 2 | 47 | Crystalstructure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4XCM_B Crystal structure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O07532 | 5.71e-18 | 14 | 115 | 22 | 135 | Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2 |
| P54421 | 1.39e-17 | 21 | 115 | 88 | 192 | Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1 |
| Q49UX4 | 6.59e-17 | 21 | 115 | 29 | 129 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=sle1 PE=3 SV=1 |
| O34669 | 2.25e-16 | 22 | 118 | 29 | 124 | Cell wall-binding protein YocH OS=Bacillus subtilis (strain 168) OX=224308 GN=yocH PE=1 SV=1 |
| Q5HRU2 | 3.23e-16 | 20 | 116 | 85 | 191 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=sle1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000066 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |