Species | Paenibacillus_B sp900539405 | |||||||||||
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Lineage | Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_B; Paenibacillus_B sp900539405 | |||||||||||
CAZyme ID | MGYG000002817_02127 | |||||||||||
CAZy Family | GT2 | |||||||||||
CAZyme Description | D-alanine--poly(phosphoribitol) ligase subunit 1 | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 18836; End: 24610 Strand: - |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
PRK05691 | PRK05691 | 0.0 | 28 | 976 | 1712 | 2653 | peptide synthase; Validated |
cd17643 | A_NRPS_Cytc1-like | 0.0 | 516 | 981 | 1 | 421 | similar to adenylation domain of cytotrienin synthetase CytC1. This family of the adenylation (A) domain of nonribosomal peptide synthases (NRPS) includes Streptomyces sp. cytotrienin synthetase (CytC1), a relatively promiscuous adenylation enzyme that installs the aminoacyl moieties on the phosphopantetheinyl arm of the holo carrier protein CytC2. Also included are Streptomyces sp Thr1, involved in the biosynthesis of 4-chlorothreonine, Pseudomonas aeruginosa pyoverdine synthetase D (PvdD), involved in the biosynthesis of the siderophore pyoverdine and Pseudomonas syringae syringopeptin synthetase, where syringpeptin is a necrosis-inducing phytotoxin that functions as a virulence determinant in the plant-pathogen interaction. The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. |
PRK12467 | PRK12467 | 0.0 | 34 | 963 | 41 | 960 | peptide synthase; Provisional |
PRK12316 | PRK12316 | 0.0 | 7 | 963 | 18 | 953 | peptide synthase; Provisional |
PRK12467 | PRK12467 | 0.0 | 33 | 963 | 1105 | 2024 | peptide synthase; Provisional |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
AXG41638.1 | 7.64e-217 | 47 | 1510 | 82 | 1539 |
AWK40831.1 | 7.64e-217 | 47 | 1510 | 82 | 1539 |
AXG46165.1 | 7.64e-217 | 47 | 1510 | 82 | 1539 |
BAY90071.1 | 1.64e-179 | 225 | 982 | 305 | 1050 |
BAZ00088.1 | 7.06e-173 | 225 | 982 | 306 | 1051 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
6P1J_A | 6.10e-160 | 47 | 962 | 8 | 916 | Thestructure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo2 serine module [Eleftheria terrae],6P1J_B The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo2 serine module [Eleftheria terrae] |
6OYF_A | 3.85e-149 | 47 | 922 | 5 | 873 | Thestructure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module [Eleftheria terrae],6OZV_A The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module in complex with AMP [Eleftheria terrae],6P4U_A The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module in complex with Mg and AMP [Eleftheria terrae] |
6P3I_A | 3.60e-143 | 47 | 922 | 5 | 873 | Thestructure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module in complex with Mg [Eleftheria terrae] |
6N8E_A | 1.07e-133 | 43 | 967 | 28 | 945 | Crystalstructure of holo-ObiF1, a five domain nonribosomal peptide synthetase from Burkholderia diffusa [Burkholderia diffusa] |
5WMM_A | 3.76e-126 | 492 | 1423 | 37 | 926 | Crystalstructure of an adenylation domain interrupted by a methylation domain (AMA4) from nonribosomal peptide synthetase TioS [Micromonospora sp. ML1] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q0VZ70 | 1.08e-240 | 38 | 1507 | 16 | 1478 | Chondramide synthase cmdD OS=Chondromyces crocatus OX=52 GN=cmdD PE=1 SV=1 |
Q70LM4 | 2.33e-226 | 34 | 1917 | 3628 | 5075 | Linear gramicidin synthase subunit D OS=Brevibacillus parabrevis OX=54914 GN=lgrD PE=1 SV=1 |
P45745 | 1.18e-197 | 39 | 982 | 1047 | 1995 | Dimodular nonribosomal peptide synthase OS=Bacillus subtilis (strain 168) OX=224308 GN=dhbF PE=1 SV=4 |
Q70LM6 | 1.71e-181 | 27 | 981 | 3615 | 4557 | Linear gramicidin synthase subunit B OS=Brevibacillus parabrevis OX=54914 GN=lgrB PE=1 SV=1 |
Q70LM5 | 7.92e-177 | 36 | 962 | 1065 | 1978 | Linear gramicidin synthase subunit C OS=Brevibacillus parabrevis OX=54914 GN=lgrC PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000075 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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