CAZyme Information: MGYG000002824_00740

Basic Information

• Species: Collinsella sp900552705
• Lineage: Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900552705
• CAZyme ID: MGYG000002824_00740
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
863	MGYG000002824_32|CGC1	93663.64	4.5633

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002824	2038947	MAG	Singapore	Asia

• Gene Location: Start: 12025; End: 14616 Strand: +

Full Sequence      

MTAYYQQVLEGTYDNHVLPFLWMKGESHKTIAEYLEKIAGADIHEVCLESRPHPDFCGEG
WWRDLRFVIDECRQLGLKLWILDDAHFPTGFANGAVKEAVPELRKIVLTHRTFDIVGPTS
AASIALANMLDKTERFYGVTFMQDGSPVDVAYRVIDDADGNPSRLVFDAPAGLTQACVMF
TSGKTSYNEDYINMVDRASVAQLIDAVYEPHFEHLGDEFGKTILGFFSDEPGFANEKGTT
GPDGIADTLIGKATAPLPWSAELERRLRAALGERYLAELPHLWDREPAGARVRHVYMDIA
STLYKECFCDQLGDWCRARGVQYIGHVIEDKDCHARLGVGAGHYFRAVGDQDMAGVDIVI
NQLVPGMDRGLHSYGRGVWDLEFYNYVLPKLGSSAAHLDPKKQGRCMAEVFGAFGWHEGL
REMKWIADHFLVRGVNWFVPHAFSMAAFPDWDCPPHFYAHGQNPQFAHFGQLMSYMNRTA
SLLSGGRATTPVALLYHADAEWAGEANFMQHAASELMRAQVDFDIVPAEAFEDAGRYAVE
IAADGSGFSVNGQAYRCLVMPGAEFVGEAVLDFAARAAAAGVAVYALDELPNKRYDGDTA
GREGFASLDAAAVAGIKLLATTELADTLANTGMQTVVCAEPQPWLRALRYERAGETYLML
VNEHPKQGISTQIALADGTPVAGARLDLLNGTEPAAFDGTLELAPYESCIVVLGATGSAG
ATTAGTEAACIDGPWTVAFSTPGTDAFGESVELADLHDLSSAEFPGKAGTFRYQASFVLG
EAASRTVIDLGEVFETATVTLDGKSLGTRICPPYRFEAGALLAGEHALTVDIINTLDHAV
PDMFGMTEPSDPSGLLGPVRVLG

Enzyme Prediction     

No EC number prediction in MGYG000002824_00740.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	28	861	6.6e-71	0.9635922330097088

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	0.005	393	563	566	732	alpha-L-rhamnosidase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AZH68834.1	0.0	1	863	1	863
ATP54541.1	0.0	13	863	4	850
QNM10672.1	7.10e-316	1	861	1	832
AGF57028.1	9.02e-250	8	862	7	846
AIQ48514.1	3.06e-210	7	861	6	865

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Q2F_A	7.69e-08	729	862	986	1139	Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000050	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002824_00740.