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CAZyme Information: MGYG000002825_04056
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Klebsiella_A indica | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella_A; Klebsiella_A indica | |||||||||||
| CAZyme ID | MGYG000002825_04056 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 12443; End: 13711 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 4 | 326 | 9.5e-63 | 0.8984615384615384 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 1.52e-50 | 2 | 249 | 117 | 393 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 4.59e-13 | 63 | 249 | 52 | 234 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03003 | PLN03003 | 6.66e-10 | 64 | 208 | 115 | 270 | Probable polygalacturonase At3g15720 |
| PLN03010 | PLN03010 | 9.81e-09 | 64 | 328 | 141 | 383 | polygalacturonase |
| PLN02793 | PLN02793 | 2.61e-08 | 53 | 250 | 134 | 331 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QCA06246.1 | 1.10e-174 | 2 | 405 | 37 | 439 |
| QGF28886.1 | 1.57e-174 | 2 | 405 | 37 | 439 |
| QZX97523.1 | 3.15e-174 | 2 | 405 | 37 | 439 |
| QXG56475.1 | 4.47e-174 | 2 | 405 | 37 | 439 |
| AWP34683.1 | 4.47e-174 | 2 | 405 | 37 | 439 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2UVE_A | 5.40e-07 | 4 | 248 | 191 | 484 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A7PZL3 | 1.21e-19 | 2 | 233 | 100 | 338 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| Q02096 | 6.70e-09 | 60 | 179 | 170 | 288 | Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1 |
| B8NPS8 | 1.78e-07 | 38 | 261 | 103 | 314 | Probable endo-xylogalacturonan hydrolase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=xghA PE=3 SV=1 |
| Q2UBD8 | 2.36e-07 | 38 | 261 | 103 | 314 | Probable endo-xylogalacturonan hydrolase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xghA PE=3 SV=1 |
| Q9Y718 | 6.45e-06 | 54 | 249 | 91 | 280 | Polygalacturonase OS=Penicillium digitatum OX=36651 GN=PG1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999742 | 0.000288 | 0.000010 | 0.000000 | 0.000000 | 0.000000 |