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CAZyme Information: MGYG000002836_02800

You are here: Home > Sequence: MGYG000002836_02800

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Anaerocolumna aminovalerica
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Anaerocolumna; Anaerocolumna aminovalerica
CAZyme ID MGYG000002836_02800
CAZy Family GH171
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
379 43265.67 6.4166
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002836 4582914 MAG United States North America
Gene Location Start: 9453;  End: 10592  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002836_02800.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH171 20 378 4.7e-141 0.9971830985915493

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07075 DUF1343 0.0 21 361 1 345
Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.
COG3876 YbbC 5.89e-174 2 378 27 409
Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SNX53310.1 7.71e-166 1 378 2 379
AUS95567.1 1.22e-165 1 378 8 385
QVK18518.1 3.18e-162 1 379 2 380
ADZ19231.1 3.95e-161 1 378 4 381
AAK78167.1 3.95e-161 1 378 4 381

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4K05_A 6.25e-94 1 379 13 399
Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343]
4JJA_A 3.63e-59 3 378 8 368
Crystalstructure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40407 2.89e-130 1 378 37 414
Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000062 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002836_02800.