CAZyme Information: MGYG000002836_02953

Basic Information

• Species: Anaerocolumna aminovalerica
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Anaerocolumna; Anaerocolumna aminovalerica
• CAZyme ID: MGYG000002836_02953
• CAZy Family: GH105
• CAZyme Description: Unsaturated rhamnogalacturonyl hydrolase YteR

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
363	MGYG000002836_26|CGC1	43284.47	5.2379

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002836	4582914	MAG	United States	North America

• Gene Location: Start: 12158; End: 13249 Strand: -

Full Sequence      

MKFYRYTDNYLKHFQGEMKKWNYEDGCVLMGCVLLYQATGDEKYQEFVLKYLNEYITNEG
TIKYYEEEKYNIDSINTGKVLFHAYEWTGREKYRKAIEVLMNQLRKHPRTKSGNFWHKMI
YPNQVWLDGLYMAQPFYMMYETKYNKKENYSDIIEQFKNVRKYLYNEEKELYYHAYDQSK
ELFWADKETGQSPNFWLRSMGWYLMALIDVMDEMEESIFEHYKTLEDLFREAIKGILKYQ
DPKSKLFYQVIDRADIKDNYLETSGSAMIGYSILKACRKGVLLKEKYQEMGEVIVDSLTE
NMLIEEDGTLKLSNMCSVAGLGPSDNPRRDGSVEYYLSEPIVCDDQKGVGAYMMAYAQKL
MIF

Enzyme Prediction     

No EC number prediction in MGYG000002836_02953.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH105	17	358	1.1e-108	0.963855421686747

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG4225	YesR	1.07e-84	1	360	9	354	Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
pfam07470	Glyco_hydro_88	6.87e-75	5	363	12	343	Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QHQ62178.1	3.85e-180	2	362	7	365
BCJ96410.1	2.40e-154	2	362	5	364
BCJ93648.1	1.13e-152	2	360	5	362
AVQ19788.1	1.62e-138	5	358	10	364
AGB20020.1	7.48e-133	5	360	6	358

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4WU0_A	7.00e-96	21	355	23	354	StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]
1NC5_A	1.39e-65	20	358	38	363	Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A	5.87e-65	20	358	28	353	ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
3QWT_A	1.23e-06	21	302	65	332	ChainA, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_B Chain B, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_C Chain C, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_D Chain D, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A]
3PMM_A	5.12e-06	21	302	66	333	ChainA, Putative cytoplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
O34559	7.61e-65	20	358	38	363	Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
P0A3U6	4.20e-39	132	362	1	231	Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7	4.20e-39	132	362	1	231	24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000067	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002836_02953.