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CAZyme Information: MGYG000002840_01289

You are here: Home > Sequence: MGYG000002840_01289

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1872 sp900549475
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; UMGS1872; UMGS1872 sp900549475
CAZyme ID MGYG000002840_01289
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
552 MGYG000002840_10|CGC1 59827.32 4.5514
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002840 2700049 MAG Germany Europe
Gene Location Start: 57969;  End: 59627  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002840_01289.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 197 546 2.9e-32 0.8986486486486487

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 1.44e-39 270 533 55 303
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
COG3858 YaaH 3.14e-22 273 533 160 408
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
cd06549 GH18_trifunctional 6.79e-19 283 544 73 298
GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
pfam00704 Glyco_hydro_18 5.42e-18 269 530 59 302
Glycosyl hydrolases family 18.
smart00636 Glyco_18 6.30e-18 270 530 63 329
Glyco_18 domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QOX64072.1 1.22e-190 2 551 3 563
QAT42616.1 9.64e-190 1 552 1 554
QHI71217.1 2.55e-187 1 552 5 554
QIB69198.1 2.06e-186 1 552 1 554
QNL45580.1 8.84e-168 2 537 3 540

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CZ8_A 1.32e-18 278 532 70 308
ChainA, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168],3CZ8_B Chain B, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168]
4S3K_A 1.68e-13 322 533 213 413
ChainA, Spore germination protein YaaH [Priestia megaterium QM B1551]
6CWR_A 3.59e-06 21 189 1 159
Crystalstructure of SpaA-SLH/G46A/G109A in complex with 4,6-Pyr-beta-D-ManNAcOMe [Paenibacillus alvei],7SV6_A Chain A, Surface (S-) layer glycoprotein [Paenibacillus alvei]
6CWM_A 8.86e-06 21 189 1 159
Crystalstructure of SpaA-SLH/G109A [Paenibacillus alvei],6CWN_A Crystal structure of SpaA-SLH/G109A in complex with 4,6-Pyr-beta-D-ManNAcOMe [Paenibacillus alvei],7SV5_A Chain A, Surface (S-) layer glycoprotein [Paenibacillus alvei],7SV5_B Chain B, Surface (S-) layer glycoprotein [Paenibacillus alvei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O05495 2.65e-18 278 532 162 400
Putative sporulation-specific glycosylase YdhD OS=Bacillus subtilis (strain 168) OX=224308 GN=ydhD PE=1 SV=2
P37531 6.96e-17 286 533 179 409
Cortical fragment-lytic enzyme OS=Bacillus subtilis (strain 168) OX=224308 GN=sleL PE=1 SV=2
C6CRV0 7.11e-13 29 201 1283 1462
Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1
P19424 6.20e-10 2 191 7 207
Endoglucanase OS=Bacillus sp. (strain KSM-635) OX=1415 PE=1 SV=1
P38535 6.51e-10 29 200 908 1083
Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000588 0.998382 0.000292 0.000257 0.000237 0.000216

TMHMM  Annotations      download full data without filtering help

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