CAZyme Information: MGYG000002844_00672

Basic Information

• Species: Collinsella sp900542315
• Lineage: Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900542315
• CAZyme ID: MGYG000002844_00672
• CAZy Family: GT4
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
400	MGYG000002844_9|CGC1	45447.2	6.5486

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002844	2198622	MAG	United States	North America

• Gene Location: Start: 34474; End: 35676 Strand: +

Full Sequence      

MSETQHIFIVGSKGIPGNYGGYETFVDRLTEAHEGNPRIRYHVACKARENGEFEYHGAHC
FNVKVPEVGPAQAIWYDVAALGRVCRYVEDNHVKHPIVYVLACRIGPFCAHFQKRIHALG
GRLYVNPDGHEWKRAKWSAPVRRYWKASESMMVRNCDLLVCDSKNIERYIHEEYDSPTYR
PATTFIAYGADTHRSPLADDAPKFTGWCAEHGLSPKGYYLVVGRFVPENNYETMIREFMS
SGTERDFALITNVNDKFLAELEERTHYSRDPRIKFVGTVYDRDLLAKIREQAYGYFHGHE
VGGTNPSLLEALGSTDLNLLLNVGFNREVAEDEALYWTKEPGNLAALIERADAMGAVEIA
ELGRRAKSRVATAYSWQHIANEYERLFLEGPQAVKGEVAE

Enzyme Prediction     

No EC number prediction in MGYG000002844_00672.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd04955	GT4-like	0.0	6	388	1	379	glycosyltransferase family 4 proteins. This family is most closely related to the GT4 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in certain bacteria and Archaea.
pfam09314	DUF1972	7.47e-95	5	191	2	186	Domain of unknown function (DUF1972). Members of this family of functionally uncharacterized domains are found in bacterial glycosyltransferases and rhamnosyltransferases.
cd03801	GT4_PimA-like	1.89e-17	6	387	1	365	phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.
COG0438	RfaB	1.06e-16	6	389	2	376	Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis].
cd03809	GT4_MtfB-like	1.60e-08	138	384	121	361	glycosyltransferases MtfB, WbpX, and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. MtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BAQ27757.1	1.01e-221	5	390	18	401
VEG24429.1	1.01e-221	5	390	18	401
AAN24082.1	2.61e-220	2	386	9	391
AUE00573.1	1.82e-217	1	388	1	387
QGM63293.1	2.37e-216	1	388	4	390

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000066	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002844_00672.