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CAZyme Information: MGYG000002845_00300

You are here: Home > Sequence: MGYG000002845_00300

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lachnoclostridium_B sp900543315
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium_B; Lachnoclostridium_B sp900543315
CAZyme ID MGYG000002845_00300
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
735 77283.82 3.8214
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002845 2730908 MAG United States North America
Gene Location Start: 301212;  End: 303419  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002845_00300.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 269 383 2e-19 0.953125

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 2.46e-21 214 392 50 236
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
pfam01832 Glucosaminidase 1.12e-12 268 334 1 77
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
smart00047 LYZ2 7.14e-08 257 392 3 147
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
PHA03169 PHA03169 4.85e-07 582 702 98 217
hypothetical protein; Provisional
NF033849 ser_rich_anae_1 1.05e-06 552 680 285 413
serine-rich protein. This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QEK17141.1 2.04e-215 2 577 3 580
AWY97555.1 3.48e-190 1 576 1 590
QOV20091.1 5.63e-132 47 494 39 485
QPS13527.1 4.94e-117 53 488 76 515
QMW73215.1 4.94e-117 53 488 76 515

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4Q2W_A 7.25e-27 126 392 59 290
CrystalStructure of pneumococcal peptidoglycan hydrolase LytB [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P59205 8.62e-25 126 392 427 658
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=lytB PE=1 SV=1
P59206 9.88e-25 126 392 471 702
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=lytB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000526 0.997189 0.001655 0.000212 0.000201 0.000179

TMHMM  Annotations      download full data without filtering help

start end
708 730