CAZyme Information: MGYG000002857_00371

Basic Information

• Species: Hydrogeniiclostridium sp900550095
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Hydrogeniiclostridium; Hydrogeniiclostridium sp900550095
• CAZyme ID: MGYG000002857_00371
• CAZy Family: GH55
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
976	MGYG000002857_25|CGC1	109596.77	4.7325

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002857	2686801	MAG	United States	North America

• Gene Location: Start: 1699; End: 4629 Strand: -

Full Sequence      

MTKQYRFAHTDSVYTHQPDDPRAVVLQTDGLQPDERGIYDVTERLQVLLDSVKQQDRRGI
VLIPEGVYSVSQTIYLPRAVRMIGFGKKRPKFVLKKDTSGFQEAPQDDKGEAVYMFWFTG
NTPRVEGYIQDANAGTFYSAVSNIDFQIEEGNPAAVVMRAHFAQHGFVSHCVFDVGQGKA
GIFDVGNEMENLVFLGGEYGIYTTKCSPGWPFVLVESAFSGQRKSAILSRECGLTLSHVE
FKDVPAADIVMDGYWEKLFWKDCVMENIAGPAIRISRENNSCTQINLRNIWCRNVPQLLL
GKDSGKVTGGEQSEYMLHTLFHGDDLTLGQSEPERKTLVDWEPASQEPEFFREICDLPPQ
ETWKNARDYGAYGNGISDDTAALQKALDECDTVYLPQGTYLLSDTLRMREGNSLIGLNPI
STQLVLGENSPAWAGMGAPKAVLETSRGGWNLVNGLGIDTASRNPRAVGCKWMASANSYM
NDVKFVGGHGQITQQQENVPVYNASRTADVNPDRPWDSQYWSLWITDNGGGAFKDVWTAN
TYAEAGFFVSETETPGVMYQVSIEHHVRHEVLLRNVANWKFLCMQTEEEVAEGPYCQPYE
MTNCHDLLFANFYSFRVIWVDNPYPSVVRAWNCENIDFLNCHNFTQMKYTIENLYVDVNT
GKTAGFWQLGRLRIPHMERAKKLPDVKGEIGKIISGLDCVDALCQAPDGAIYICDSRLYR
IYRWDPETETMILLTSQHFQPLSLVCDSQGRLLVVTEYQPVKNSVVNGIEELATDEFGGE
SGGGCYYPFFSYDRRIRVCAIDPKAPEASLELLPVVSLEQAKPDILYYPANQWRDSGDMM
ESFAKNDISCYLAPDGKTAIVHTPALARACGLTPLCPGKPAYLVDEYNKCIVQVQVGNDF
ALSNPTVWAERGEYGFAMTEDGDAYIPDCLLYIYVDGEKKDTIQLHDRPACVLEAGKNKE
YLYITARRDVYALRLK

Enzyme Prediction     

No EC number prediction in MGYG000002857_00371.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH55	51	600	3.5e-73	0.754054054054054

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam12708	Pectate_lyase_3	3.29e-14	363	496	1	145	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
pfam12708	Pectate_lyase_3	4.02e-09	30	203	8	171	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
COG5434	Pgu1	8.56e-09	365	474	84	222	Polygalacturonase [Carbohydrate transport and metabolism].
cd05819	NHL	0.003	706	755	16	71	NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ADU28861.1	0.0	9	975	8	980
QMI79027.1	1.15e-291	11	976	25	1004
BBK89258.1	2.10e-289	11	976	25	1004
QQA31095.1	2.10e-289	11	976	25	1004
QUT62545.1	2.10e-289	11	976	25	1004

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000049	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002857_00371.