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CAZyme Information: MGYG000002857_01764

You are here: Home > Sequence: MGYG000002857_01764

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Hydrogeniiclostridium sp900550095
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Hydrogeniiclostridium; Hydrogeniiclostridium sp900550095
CAZyme ID MGYG000002857_01764
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
872 98831.67 5.3324
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002857 2686801 MAG United States North America
Gene Location Start: 34;  End: 2652  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002857_01764.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 1 515 3.8e-43 0.6116504854368932

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 3.63e-05 1 381 404 768
alpha-L-rhamnosidase.
cd03143 A4_beta-galactosidase_middle_domain 0.004 269 371 1 85
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUS98191.1 3.56e-304 1 862 203 1042
CEP78513.1 3.94e-294 1 854 202 1034
QCU02329.1 1.51e-282 1 851 201 1061
AJG98234.1 3.05e-282 1 856 204 1035
AEF82861.1 7.18e-281 1 854 201 1036

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000048 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002857_01764.