CAZyme Information: MGYG000002857_02300

Basic Information

• Species: Hydrogeniiclostridium sp900550095
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Hydrogeniiclostridium; Hydrogeniiclostridium sp900550095
• CAZyme ID: MGYG000002857_02300
• CAZy Family: GH136
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
461	MGYG000002857_434|CGC1	51114.73	4.9359

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002857	2686801	MAG	United States	North America

• Gene Location: Start: 55; End: 1440 Strand: +

Full Sequence      

MNKDTDRIFYVNAETGSDGNEGISPEAAWKTLARVNAEPLKPGDRVRLRRGCRWDEVLRP
QGDGCFGAPVILEGYGEGESPWIAGDGGYAALFLDGVSFYTVDGLKVTNHGAERGIRSGI
CVRGKARGVTEGISVLNCEITDVNGENRRAMGVYKSMYWNSGIYVTFPGRTSEKDHLHDI
LIQGNYVHDVHTSGIRVNQQEDFINDIHHTHVVVRGNRIERTGSDGIIVANCISPLIDGN
RCFDAGALGNTKDTQLIAGVWVCATENALIQRNEVARTSLFEADGSAFDTDWGTAGDTVF
QYNYTHGNKGGFWLDCIGLNHNEECGRTILRYNISIGDEKAVTREDKGLPAEIYGNYFGG
LRQMPEVCTRDSGCSHSFFSNIFDYEKEPENGFKASHYRGNWYGAMENMPEDPEGKPGVP
FDTEAMKASEDGAVPEGLDWCWEYWERLASLVTKEKRKNRS

Enzyme Prediction     

No EC number prediction in MGYG000002857_02300.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH136	7	411	2.7e-83	0.845213849287169

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13229	Beta_helix	5.08e-06	90	249	1	117	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCJ99951.1	1.17e-199	7	456	9	455
QOV18756.1	8.18e-186	7	452	5	445
QHT63103.1	7.41e-54	9	358	39	393
QHW32936.1	2.40e-53	9	414	42	475
QHW32944.1	2.57e-53	9	358	39	393

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7V6M_A	1.89e-26	1	412	1	490	ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
6KQT_A	1.87e-25	9	367	247	646	CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099]
6KQS_A	1.08e-24	9	367	247	646	CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099]
5GQC_A	3.05e-24	9	437	20	527	Crystalstructure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_C Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_D Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_E Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_F Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_G Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_H Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQF_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQF_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000063	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002857_02300.