CAZyme Information: MGYG000002863_00106

Basic Information

• Species: Agathobaculum desmolans
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Butyricicoccaceae; Agathobaculum; Agathobaculum desmolans
• CAZyme ID: MGYG000002863_00106
• CAZy Family: CBM54
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1620		177262.32	4.8718

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002863	1733245	MAG	United States	North America

• Gene Location: Start: 111; End: 4973 Strand: -

Full Sequence      

MSHFISHMTRIAKRVCALSLCAALLLGMLPLTTPPAQAGWEDVYLNKLVSWDIMRGDQHG
NLDPGRAITRAEFATMLNRTFGYHKTGTHPFRDVRPADWFYDDISMAYTAGYFQGTSNST
ASPHATLTREEAATMLCRNLMLQPQSGEDLSFTDSRKASSWSRGYIKAAAKKGVLNGYVD
GTFRPRNRITRGEVASMLVNVIGTPIQSAGTYSNSVSGNLMVSASGVTLENMTVTGDLYI
TPGVGLGYVTLNNVTVYGQIIASGAGESNKGDASIILKNCTAPEMIVDSPTNQYVTIRTV
GNTDIDRVYIRTNTYLEGKSTGRHGFAYVEVDGEEGTQLDLAGNMHEVVTMSPKSTINVG
SGTVEKLTVDENAVGSKVTIAQGAVVEQMNLDTGTTVTGKGDIGTLHVNAPGCTVEMLPD
TIIIRPGITANINGTIMDSTMADQMSDKPRILSGYPRLSDVAPNQTEASFMTNKPGKLYW
AVRLSGDGAFDANDLIKPPSYGGKIVKSGNLSVKDANDVLSQKITGLQPGASYVLSAVLV
DARDDRSTVKSVYFTTPDNSKPNFASGYPKTSTIEDTYIAFDVAATKTCTLYWAIYKKGM
PAPTANDFKDGSLSGAISSGKGKLIRSEEDNILMGNKDKHAKDALAEVTEYDAYFFLTDT
INDSAVKKVSVKTADRTPPIFRTNYPRISKIDAKALTGESMINEAGKVYWAIVKHGTENY
PQSNPELDEEAQEIDKKLQIKGGMYALKSGSFSAKQDAVSSFNMSGLDAETAYDIYFVAE
DTAGNLSEIKSILNAKTLDNSRPELVELRFSQANDEGRPLANTDVTLVFSEDIYNSQAKM
SLVEMYASGKNEFTLAGDKNQTKVQWIDIIKGMFEFHNLDNPTDQRKQDLNLGADGRENI
TVKLNEEGQTEVTFANAALKLQSGATYQFVLNNITDSSNNVMPANTKSKEFRVLDAQVDF
NKLQYTAADIDKLNPAGVEASFSMIPYANSTENVPDGTKYDLLIASDTTISFKLYRRDLS
AENPAWEVVTDKKGPVEFTINKTPAEKWTAASLNRAKGLEPTDYPQLNQLVKGYEYAVEF
TSINLDRDRNKWDATVNLYMYCVAGSPNDLQNLTSGGIVEQSFWDSYVIQQKKLASIGNP
SDFTIDVRRVNQNAPQFMQGYPRVTPGDSLTRVDYMLDREADVYYVVAPVNRLKPETNTP
NLIIDIGKFQNDTEAEQALKEPGKREEQGITAPTTQNIMNPSNYTPANGYQTGKVHYGGT
GRGSFTVEDLQPNQEYYIYFVLKGSYKDPSPVWCYTFNTSDVVPPVLIANSTGDGQATFS
VKPAKGQTSVEAEVHWLLYPQATQTGYPPLFTTQINGKTALEMMESDAFDEWSSDTPTGG
YDNSTVFKEALWEIMQGGSNASPAPDQNGAERNFSDKDTPKTVIDKNLLKPEPTKYLFIV
AAKNELGGLPVFRVVKNIQKVNRSGPLVKSMNTTSTYSTKKNWYNGTVTINFDTELYVYG
GGSPDMPQPEAYIPTPDRGTTDLFPANSVEYVRVSNLNPTRSIGVQFNNFVVGNSFTITP
TNGKGNGGYFSNKSGYMRTDGSITFTLQYKRDSDGNPIEEDGANKVEFVLSDGTTSETNP

Enzyme Prediction     

No EC number prediction in MGYG000002863_00106.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM54	197	313	1.2e-23	0.9736842105263158

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00395	SLH	4.16e-10	152	194	1	42	S-layer homology domain.
NF033190	inl_like_NEAT_1	4.54e-10	40	202	590	752	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
NF033190	inl_like_NEAT_1	1.47e-06	63	201	554	690	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
pfam00395	SLH	4.27e-06	91	132	1	42	S-layer homology domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QIA32369.1	2.67e-311	13	1497	10	1496
QQR07714.1	2.91e-310	13	1497	10	1496
BCK84769.1	8.62e-259	10	1588	14	1622
AMJ42396.1	3.82e-195	40	1497	50	1617
QAT42028.1	5.29e-192	13	1497	2	1398

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5GZT_A	2.98e-09	191	268	33	108	CrystalStructure of Chitinase ChiW from Paenibacillus sp. str. FPU-7 Reveals a Novel Type of Bacterial Cell-Surface-Expressed Multi-Modular Enzyme Machinery [Paenibacillus sp. FPU-7]
6BT4_A	3.62e-09	84	211	16	143	Crystalstructure of the SLH domain of Sap from Bacillus anthracis in complex with a pyruvylated SCWP unit [Bacillus anthracis]
3PYW_A	6.74e-09	91	211	5	122	Thestructure of the SLH domain from B. anthracis surface array protein at 1.8A [Bacillus anthracis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P38536	2.92e-17	40	202	1689	1855	Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2
P38537	8.31e-16	38	205	40	213	Surface-layer 125 kDa protein OS=Lysinibacillus sphaericus OX=1421 PE=3 SV=1
P19424	2.51e-14	37	202	46	214	Endoglucanase OS=Bacillus sp. (strain KSM-635) OX=1415 PE=1 SV=1
Q06852	4.90e-11	30	198	2089	2260	Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2
P06546	2.34e-09	32	259	30	262	Middle cell wall protein OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) OX=358681 GN=BBR47_54160 PE=4 SV=4

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000392	0.998767	0.000234	0.000212	0.000188	0.000162

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002863_00106.