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CAZyme Information: MGYG000002871_00206

You are here: Home > Sequence: MGYG000002871_00206

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900555815
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900555815
CAZyme ID MGYG000002871_00206
CAZy Family GH33
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
386 42812.18 5.1149
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002871 1434744 MAG United States North America
Gene Location Start: 260;  End: 1420  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002871_00206.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH33 31 363 6e-33 0.9444444444444444

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13088 BNR_2 2.41e-62 47 347 1 280
BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases.
cd15482 Sialidase_non-viral 2.06e-60 30 363 8 339
Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.
COG4692 COG4692 1.97e-39 22 362 20 371
Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism, Cell wall/membrane/envelope biogenesis].
COG4447 COG4447 0.002 133 248 110 206
Uncharacterized protein related to plant photosystem II stability/assembly factor [General function prediction only].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBL01983.1 1.10e-304 1 386 1 386
AXB29891.1 1.82e-303 1 386 1 386
CBK76990.1 5.86e-275 1 386 1 386
QUO31282.1 1.48e-268 1 385 1 385
CAB1239511.1 7.01e-267 1 386 1 386

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000072 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002871_00206.