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CAZyme Information: MGYG000002872_00870

You are here: Home > Sequence: MGYG000002872_00870

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS874 sp900546315
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-272; UMGS874; UMGS874 sp900546315
CAZyme ID MGYG000002872_00870
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1033 MGYG000002872_19|CGC1 116879.81 4.9823
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002872 3007809 MAG United States North America
Gene Location Start: 242;  End: 3343  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002872_00870.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 16 712 2.2e-55 0.787621359223301

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 5.74e-09 193 683 401 873
alpha-L-rhamnosidase.
cd03143 A4_beta-galactosidase_middle_domain 1.42e-05 465 566 2 85
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.
pfam08532 Glyco_hydro_42M 0.001 465 566 4 89
Beta-galactosidase trimerisation domain. This is non catalytic domain B of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. This domain is related to glutamine amidotransferase enzymes, but the catalytic residues are replaced by non functional amino acids. This domain is involved in trimerisation.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUS98191.1 0.0 1 1032 1 1037
CEP78513.1 0.0 1 1032 1 1037
AJG98234.1 0.0 1 1026 1 1030
AEF82861.1 0.0 1 1026 1 1033
QCU02329.1 0.0 1 1029 1 1064

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002872_00870.