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CAZyme Information: MGYG000002872_01292
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UMGS874 sp900546315 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-272; UMGS874; UMGS874 sp900546315 | |||||||||||
| CAZyme ID | MGYG000002872_01292 | |||||||||||
| CAZy Family | GH33 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 11592; End: 13490 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH33 | 298 | 590 | 2.3e-28 | 0.9005847953216374 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd15482 | Sialidase_non-viral | 5.75e-38 | 301 | 603 | 16 | 339 | Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases. |
| COG1414 | IclR | 8.96e-33 | 3 | 244 | 1 | 242 | DNA-binding transcriptional regulator, IclR family [Transcription]. |
| pfam13088 | BNR_2 | 2.76e-27 | 355 | 585 | 50 | 280 | BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. |
| PRK11569 | PRK11569 | 7.74e-16 | 3 | 244 | 25 | 268 | glyoxylate bypass operon transcriptional repressor IclR. |
| pfam09339 | HTH_IclR | 1.29e-12 | 4 | 55 | 1 | 52 | IclR helix-turn-helix domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QDV18612.1 | 2.15e-113 | 286 | 630 | 44 | 394 |
| QDU50763.1 | 1.20e-112 | 287 | 630 | 45 | 394 |
| QDT27911.1 | 1.89e-111 | 287 | 630 | 45 | 394 |
| QDT85478.1 | 2.67e-111 | 287 | 628 | 45 | 392 |
| QDT21480.1 | 5.32e-111 | 287 | 628 | 45 | 392 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3R4K_A | 5.08e-08 | 4 | 184 | 4 | 186 | ChainA, Transcriptional regulator, IclR family [Ruegeria sp. TM1040],3R4K_B Chain B, Transcriptional regulator, IclR family [Ruegeria sp. TM1040],3R4K_C Chain C, Transcriptional regulator, IclR family [Ruegeria sp. TM1040],3R4K_D Chain D, Transcriptional regulator, IclR family [Ruegeria sp. TM1040] |
| 3MQ0_A | 4.51e-06 | 4 | 210 | 28 | 234 | ChainA, Transcriptional repressor of the blcABC operon [Agrobacterium tumefaciens],3MQ0_B Chain B, Transcriptional repressor of the blcABC operon [Agrobacterium tumefaciens] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P17430 | 1.02e-15 | 3 | 242 | 25 | 266 | Acetate operon repressor OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=iclR PE=4 SV=2 |
| P16528 | 3.69e-14 | 3 | 199 | 25 | 225 | Transcriptional repressor IclR OS=Escherichia coli (strain K12) OX=83333 GN=iclR PE=1 SV=1 |
| D4GP42 | 2.12e-13 | 3 | 206 | 8 | 210 | HTH-type transcriptional regulator XacR OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) OX=309800 GN=xacR PE=1 SV=1 |
| Q0K846 | 3.05e-09 | 2 | 200 | 6 | 206 | Probable transcriptional regulator SauR OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=sauR PE=4 SV=1 |
| P39360 | 1.12e-08 | 4 | 213 | 8 | 219 | Uncharacterized HTH-type transcriptional regulator YjhI OS=Escherichia coli (strain K12) OX=83333 GN=yjhI PE=4 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000067 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |