CAZyme Information: MGYG000002877_01593

Basic Information

• Species: Prevotella sp900550365
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900550365
• CAZyme ID: MGYG000002877_01593
• CAZy Family: GT2
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1262	MGYG000002877_27|CGC1	143062.45	6.034

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002877	2502849	MAG	United States	North America

• Gene Location: Start: 15677; End: 19465 Strand: +

Full Sequence      

MFGTIDCFLPCSDFGAVENVLRQLRGSRMIRHINLLVTRGFALGNAVPEGCSFIVVDGLM
SESAMRSVAESVMADYAMMFLKDVPVSLGQYAIQRMARVASETDAAMVYSDRYTVSGGHI
EPHPVIDWQEGSLRDDFDFGPVVMINARLLHDFAGEADERGFRFAGWYELWLYLSRHGRL
FHINELLYTEEERDTRASGVKQFDYVNPANRQVQQEMERVVTAHLKKVGALVDTSYYAEP
DFAEQEFECEATVVIPVRNREKTIRDAVDSALSQKTTFKYNVIVVDNHSTDNTTALLDAY
TDERLIHIVPRRTDLGIGGCWNLAVDDARCGRFAVQLDSDDLYSSPETLQTIVDAFYSQR
AAMIIGSYRMCDFDLNTLPPGLIDHAEWTDTNGCNNALRINGLGAPRAFFTPLLRQIRFP
NTSYGEDYALGLAFSRRYRIGRIYTELYLCRRWGGNSDAALSIDKVNANNLYKDRLRTME
LMARKKMNAGEGFIKADDTLLRFFNRQLETWTLARRNYRDLHDVSTRGISDGGNNLALQF
NPARIVSTGASISKESISHRPCFLCRANRPKEQMIKHLGDNFEMLVNPYPIMPVHFTIPM
CAHQPQRILENYPEMHRLLARFPDLTVFYNGPQCGASAPDHMHFQAFTQGRLPLQAAWPR
LQRELVKVCSLDNGDDISVISGWVCPAILVRSRSAENGIALFRRVYDALPVPEDAPEPMM
NIVAWMAGEVCHTVVFPRAKHRPDCYYVDEEQASGHKILVSPGAIDMAGLIITPRKEDFD
SLTARQACDILREVSLDRTAMDHVVARIHRDMPCSTDAKDTTCGHHEPIVQVGILSSERI
CFVLNGHYVAKGEVISGRQEVAFSEGGILWNGNLYRELTFLPDCHDASFSLEDVTIGVNF
HWQRKETQTFQGTLKLVVEADKVCAINCLPVEDYLVSVISSEMKATSSLEFLKAHAVISR
SWLLSQMERRKRQERGGNGFFSFIKKDDELIRWYDRDDHAIFDVCADDHCQRYQGITRAN
NVHVEQAVRETRGRILMYGDEICDARFSKCCGGVTEEFQYCWEDKPQPYLVALRDTDDRH
AGIPDLTDEAEVEKWIRSCPDSFCNTTDKNVLSQVLNDYDCETSDFYRWHVEYSQEQLSA
LIADKLKMDFGQITDLVPVKRGRSGRICKLRIVGTKRTFTIGKELEIRRALSDTHLYSSA
FVVDRLDITDGVPARFVLTGAGWGHGVGLCQIGAAVMGERGCSYDEILLHYYRGAEIRKK
YE

Enzyme Prediction     

No EC number prediction in MGYG000002877_01593.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT2	252	377	1.7e-20	0.7294117647058823

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16269	DUF4922	8.64e-98	611	802	1	188	Domain of unknown function (DUF4922). This family consists of uncharacterized proteins around 310 residues in length and is mainly found in various Bacteroides and Parabacteroides species. Several members are annotated as putative glycosyltransferases, but the specific function of this family is still unknown.
TIGR02669	SpoIID_LytB	2.95e-49	925	1257	2	265	SpoIID/LytB domain. This model describes a domain found typically in two or three proteins per genome in Cyanobacteria and Firmicutes, and sporadically in other genomes. One member is SpoIID of Bacillus subtilis. Another in B. subtilis is the C-terminal half of LytB, encoded immediately upstream of an amidase, the autolysin LytC, to which its N-terminus is homologous. Gene neighborhoods are not well conserved for members of this family, as many, such as SpoIID, are monocistronic. One early modelling-based study suggests a DNA-binding role for SpoIID, but the function of this domain is unknown. [Unknown function, General]
COG2385	SpoIID	3.19e-39	926	1258	139	391	Peptidoglycan hydrolase (amidase) enhancer domain [Cell wall/membrane/envelope biogenesis].
TIGR02870	spore_II_D	3.40e-35	925	1259	68	337	stage II sporulation protein D. Stage II sporulation protein D (SpoIID) is a protein of the endospore formation program in a number of lineages in the Firmicutes (low-GC Gram-positive bacteria). It is expressed in the mother cell compartment, under control of Sigma-E. SpoIID, along with SpoIIM and SpoIIP, is one of three major proteins involved in engulfment of the forespore by the mother cell. [Cellular processes, Sporulation and germination]
pfam08486	SpoIID	1.89e-27	919	1037	1	100	Stage II sporulation protein. This domain is found in the stage II sporulation protein SpoIID. SpoIID is necessary for membrane migration as well as for some of the earlier steps in engulfment during bacterial endospore formation. The domain is also found in amidase enhancer proteins. Amidases, like SpoIID, are cell wall hydrolases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCS84357.1	0.0	1	1262	1	1253
QNT65264.1	0.0	5	1262	5	1260
ADE82754.1	0.0	5	1262	5	1224
QVJ80566.1	0.0	5	1262	5	1224
QYR11045.1	0.0	5	1262	4	1246

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5I1T_A	8.80e-10	929	1261	64	330	ChainA, Stage II sporulation protein D [Clostridioides difficile 630]
5TXU_A	1.04e-09	929	1261	88	354	ChainA, Stage II sporulation protein D [Clostridioides difficile 630]
4RWR_A	6.59e-09	914	1258	51	318	2.1Angstrom Crystal Structure of Stage II Sporulation Protein D from Bacillus anthracis [Bacillus anthracis],4RWR_B 2.1 Angstrom Crystal Structure of Stage II Sporulation Protein D from Bacillus anthracis [Bacillus anthracis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
C0QYX7	4.83e-14	910	1257	88	351	Uncharacterized protein BHWA1_00569 OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) OX=565034 GN=BHWA1_00569 PE=1 SV=1
Q02113	4.08e-11	935	1257	422	702	Amidase enhancer OS=Bacillus subtilis (strain 168) OX=224308 GN=lytB PE=1 SV=1
P13251	4.03e-10	905	1257	47	330	Stage II sporulation protein D OS=Bacillus amyloliquefaciens OX=1390 GN=spoIID PE=4 SV=1
P07372	3.90e-08	878	1257	21	329	Stage II sporulation protein D OS=Bacillus subtilis (strain 168) OX=224308 GN=spoIID PE=4 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000060	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002877_01593.