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CAZyme Information: MGYG000002878_01180

You are here: Home > Sequence: MGYG000002878_01180

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RC9 sp900546395
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp900546395
CAZyme ID MGYG000002878_01180
CAZy Family GT83
CAZyme Description Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
545 MGYG000002878_32|CGC1 61216.25 8.0679
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002878 2590775 MAG United States North America
Gene Location Start: 16389;  End: 18026  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002878_01180.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT83 6 470 4.5e-67 0.837037037037037

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1807 ArnT 1.26e-25 1 393 1 390
4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis].
pfam13231 PMT_2 4.66e-07 63 231 1 157
Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.
PRK13279 arnT 2.79e-05 119 412 82 403
lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QKH86812.1 2.61e-130 16 539 9 512
QLK84536.1 3.69e-130 16 539 9 512
QTO25703.1 5.21e-130 16 539 9 512
QUU03965.1 2.97e-126 16 539 9 512
QRP88934.1 1.67e-125 16 539 9 512

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O67270 1.17e-08 34 332 29 311
Uncharacterized protein aq_1220 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1220 PE=3 SV=1
Q4ZSZ0 8.92e-08 17 329 17 319
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=arnT PE=3 SV=1
Q48HY9 7.47e-06 34 329 32 318
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) OX=264730 GN=arnT PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.997744 0.002224 0.000012 0.000006 0.000004 0.000043

TMHMM  Annotations      download full data without filtering help

start end
10 27
78 100
123 142
147 166
181 203
215 237
271 293
300 319
323 340
353 375
395 417
424 443