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CAZyme Information: MGYG000002878_02013

You are here: Home > Sequence: MGYG000002878_02013

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RC9 sp900546395
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp900546395
CAZyme ID MGYG000002878_02013
CAZy Family GH171
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
355 MGYG000002878_93|CGC1 40239.74 5.4456
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002878 2590775 MAG United States North America
Gene Location Start: 6504;  End: 7571  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002878_02013.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH171 67 347 2.1e-54 0.8056338028169014

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3876 YbbC 6.23e-33 64 347 111 409
Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AGH13506.1 3.21e-164 1 355 1 355
AGY53847.1 1.94e-95 1 355 1 408
AXR64625.1 2.17e-42 12 342 12 386
AXR68344.1 2.17e-42 12 342 12 386
AXR60760.1 2.17e-42 12 342 12 386

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4JJA_A 8.71e-09 64 349 89 370
Crystalstructure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution [Bacteroides fragilis NCTC 9343]
4K05_A 3.95e-08 29 270 83 313
Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40407 8.63e-25 64 347 122 414
Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000056 0.000005 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002878_02013.