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CAZyme Information: MGYG000002888_00844
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Corynebacterium kroppenstedtii_A | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium kroppenstedtii_A | |||||||||||
| CAZyme ID | MGYG000002888_00844 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3510; End: 4280 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH23 | 104 | 249 | 1.3e-17 | 0.8074074074074075 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG2951 | MltB | 2.15e-30 | 39 | 249 | 57 | 275 | Membrane-bound lytic murein transglycosylase B [Cell wall/membrane/envelope biogenesis]. |
| cd13399 | Slt35-like | 1.09e-21 | 101 | 247 | 1 | 107 | Slt35-like lytic transglycosylase. Lytic transglycosylase similar to Escherichia coli lytic transglycosylase Slt35 and Pseudomonas aeruginosa Sltb1. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc) as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). |
| pfam13406 | SLT_2 | 7.51e-07 | 172 | 212 | 155 | 196 | Transglycosylase SLT domain. This family is related to the SLT domain pfam01464. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QRP11186.1 | 5.69e-187 | 1 | 256 | 1 | 256 |
| ACR17321.1 | 5.69e-187 | 1 | 256 | 1 | 256 |
| QRQ65032.1 | 7.76e-185 | 1 | 255 | 1 | 255 |
| QRP14919.1 | 2.14e-182 | 1 | 255 | 1 | 255 |
| AKK02735.1 | 1.45e-93 | 6 | 253 | 15 | 259 |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999839 | 0.000173 | 0.000012 | 0.000001 | 0.000000 | 0.000007 |
