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CAZyme Information: MGYG000002889_02513

You are here: Home > Sequence: MGYG000002889_02513

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pantoea sp002920175
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pantoea; Pantoea sp002920175
CAZyme ID MGYG000002889_02513
CAZy Family GT17
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
296 MGYG000002889_20|CGC1 35455.79 9.2085
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002889 4513078 MAG United States North America
Gene Location Start: 67531;  End: 68421  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002889_02513.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT17 2 290 5.9e-65 0.9119718309859155

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam04724 Glyco_transf_17 1.45e-18 2 289 75 338
Glycosyltransferase family 17. This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC:2.4.1.144). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumor progression.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVV37911.1 9.82e-185 1 294 1 294
QPG28865.1 1.89e-182 1 294 1 294
QGF28791.1 5.09e-164 1 295 1 295
QXG56372.1 1.20e-162 1 295 1 295
QNQ60511.1 6.90e-162 1 295 1 295

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000070 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002889_02513.