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CAZyme Information: MGYG000002889_02906

You are here: Home > Sequence: MGYG000002889_02906

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pantoea sp002920175
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pantoea; Pantoea sp002920175
CAZyme ID MGYG000002889_02906
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1251 MGYG000002889_26|CGC4 140057.91 5.9819
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002889 4513078 MAG United States North America
Gene Location Start: 55521;  End: 59276  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002889_02906.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd04950 GT4_TuaH-like 4.13e-115 389 745 6 369
teichuronic acid biosynthesis glycosyltransferase TuaH and similar proteins. Members of this family may function in teichuronic acid biosynthesis/cell wall biogenesis. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
PRK07208 PRK07208 4.31e-46 775 1242 4 459
hypothetical protein; Provisional
COG1232 HemY 1.45e-39 779 1242 4 444
Protoporphyrinogen oxidase [Coenzyme transport and metabolism].
PRK07233 PRK07233 4.46e-14 780 1109 4 295
hypothetical protein; Provisional
pfam13450 NAD_binding_8 4.84e-13 780 842 1 68
NAD(P)-binding Rossmann-like domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNH52898.1 0.0 1 1251 1 1242
QDY43813.1 0.0 1 1251 1 1242
QAV43838.1 0.0 1 1249 1 1251
QAV48678.1 0.0 1 1249 1 1251
QIA54119.1 0.0 1 1249 1 1251

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4DSG_A 4.18e-44 779 1251 13 462
CrystalStructure of oxidized UDP-Galactopyranose mutase [Trypanosoma cruzi],4DSG_B Crystal Structure of oxidized UDP-Galactopyranose mutase [Trypanosoma cruzi],4DSH_A Crystal structure of reduced UDP-Galactopyranose mutase [Trypanosoma cruzi],4DSH_B Crystal structure of reduced UDP-Galactopyranose mutase [Trypanosoma cruzi]
3UTE_A 5.76e-43 776 1240 11 475
Crystalstructure of Aspergillus fumigatus UDP galactopyranose mutase sulfate complex [Aspergillus fumigatus],3UTE_B Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase sulfate complex [Aspergillus fumigatus],3UTE_C Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase sulfate complex [Aspergillus fumigatus],3UTE_D Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase sulfate complex [Aspergillus fumigatus],3UTF_A Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase in reduced state [Aspergillus fumigatus],3UTF_B Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase in reduced state [Aspergillus fumigatus],3UTF_C Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase in reduced state [Aspergillus fumigatus],3UTF_D Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase in reduced state [Aspergillus fumigatus],3UTG_A Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase complexed with UDP in reduced state [Aspergillus fumigatus],3UTG_B Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase complexed with UDP in reduced state [Aspergillus fumigatus],3UTG_C Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase complexed with UDP in reduced state [Aspergillus fumigatus],3UTG_D Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase complexed with UDP in reduced state [Aspergillus fumigatus],3UTH_A Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase complexed with substrate UDP-Galp in reduced state [Aspergillus fumigatus],3UTH_B Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase complexed with substrate UDP-Galp in reduced state [Aspergillus fumigatus],3UTH_C Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase complexed with substrate UDP-Galp in reduced state [Aspergillus fumigatus],3UTH_D Crystal structure of Aspergillus fumigatus UDP galactopyranose mutase complexed with substrate UDP-Galp in reduced state [Aspergillus fumigatus],4GDE_A Crystal structure of NADPH-reduced Aspergillus fumigatus UDP-galactopyranose [Aspergillus fumigatus],4GDE_B Crystal structure of NADPH-reduced Aspergillus fumigatus UDP-galactopyranose [Aspergillus fumigatus],4GDE_C Crystal structure of NADPH-reduced Aspergillus fumigatus UDP-galactopyranose [Aspergillus fumigatus],4GDE_D Crystal structure of NADPH-reduced Aspergillus fumigatus UDP-galactopyranose [Aspergillus fumigatus],5VWT_A Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADPH [Aspergillus fumigatus],5VWT_B Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADPH [Aspergillus fumigatus],5VWT_C Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADPH [Aspergillus fumigatus],5VWT_D Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADPH [Aspergillus fumigatus],5VWU_A Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADH [Aspergillus fumigatus],5VWU_B Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADH [Aspergillus fumigatus],5VWU_C Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADH [Aspergillus fumigatus],5VWU_D Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADH [Aspergillus fumigatus]
3UKL_A 1.34e-42 776 1240 7 471
Crystalstructure of UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDP [Aspergillus fumigatus],3UKL_B Crystal structure of UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDP [Aspergillus fumigatus],3UKL_C Crystal structure of UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDP [Aspergillus fumigatus],3UKL_D Crystal structure of UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDP [Aspergillus fumigatus],3UKL_E Crystal structure of UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDP [Aspergillus fumigatus],3UKL_F Crystal structure of UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDP [Aspergillus fumigatus],3UKL_G Crystal structure of UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDP [Aspergillus fumigatus],3UKL_H Crystal structure of UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDP [Aspergillus fumigatus]
3UKH_A 1.56e-42 776 1240 7 471
Crystalstructure of udp-galactopyranose mutase from Aspergillus fumigatus in complex with UDPGALP (non-reduced) [Aspergillus fumigatus],3UKH_B Crystal structure of udp-galactopyranose mutase from Aspergillus fumigatus in complex with UDPGALP (non-reduced) [Aspergillus fumigatus],3UKH_C Crystal structure of udp-galactopyranose mutase from Aspergillus fumigatus in complex with UDPGALP (non-reduced) [Aspergillus fumigatus],3UKH_D Crystal structure of udp-galactopyranose mutase from Aspergillus fumigatus in complex with UDPGALP (non-reduced) [Aspergillus fumigatus],3UKH_E Crystal structure of udp-galactopyranose mutase from Aspergillus fumigatus in complex with UDPGALP (non-reduced) [Aspergillus fumigatus],3UKH_F Crystal structure of udp-galactopyranose mutase from Aspergillus fumigatus in complex with UDPGALP (non-reduced) [Aspergillus fumigatus],3UKH_G Crystal structure of udp-galactopyranose mutase from Aspergillus fumigatus in complex with UDPGALP (non-reduced) [Aspergillus fumigatus],3UKH_H Crystal structure of udp-galactopyranose mutase from Aspergillus fumigatus in complex with UDPGALP (non-reduced) [Aspergillus fumigatus]
3UKQ_A 3.27e-42 776 1240 7 471
Crystalstructure of R327K UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDPgalp [Aspergillus fumigatus],3UKQ_B Crystal structure of R327K UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDPgalp [Aspergillus fumigatus],3UKQ_C Crystal structure of R327K UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDPgalp [Aspergillus fumigatus],3UKQ_D Crystal structure of R327K UDP-galactopyranose mutase from Aspergillus fumigatus in complex with UDPgalp [Aspergillus fumigatus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999938 0.000097 0.000006 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002889_02906.