logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002889_03141

You are here: Home > Sequence: MGYG000002889_03141

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pantoea sp002920175
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pantoea; Pantoea sp002920175
CAZyme ID MGYG000002889_03141
CAZy Family GH103
CAZyme Description Membrane-bound lytic murein transglycosylase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
360 MGYG000002889_30|CGC1 39790.06 7.1828
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002889 4513078 MAG United States North America
Gene Location Start: 56235;  End: 57317  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002889_03141.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH103 62 351 6.8e-95 0.9694915254237289

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10760 PRK10760 0.0 1 357 3 359
murein hydrolase B; Provisional
TIGR02282 MltB 3.94e-148 60 351 2 290
lytic murein transglycosylase B. This family consists of lytic murein transglycosylases (murein hydrolases) in the family of MltB, which is a membrane-bound lipoprotein in Escherichia coli. The N-terminal lipoprotein modification motif is conserved in about half the members of this family. The term Slt35 describes a naturally occurring soluble fragment of MltB. Members of this family never contain the putative peptidoglycan binding domain described by pfam01471, which is associated with several classes of bacterial cell wall lytic enzymes. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
pfam13406 SLT_2 1.44e-119 55 349 3 292
Transglycosylase SLT domain. This family is related to the SLT domain pfam01464.
COG2951 MltB 1.24e-115 27 355 17 339
Membrane-bound lytic murein transglycosylase B [Cell wall/membrane/envelope biogenesis].
cd13399 Slt35-like 1.06e-29 144 350 1 108
Slt35-like lytic transglycosylase. Lytic transglycosylase similar to Escherichia coli lytic transglycosylase Slt35 and Pseudomonas aeruginosa Sltb1. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc) as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGY30309.1 2.40e-238 1 360 1 360
QCP60581.1 1.89e-235 1 360 1 360
QZY95713.1 5.41e-235 1 359 1 359
QFS59530.1 5.41e-235 1 359 1 359
QZY91184.1 5.41e-235 1 359 1 359

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1D0K_A 1.78e-186 38 355 1 320
ChainA, 35KD SOLUBLE LYTIC TRANSGLYCOSYLASE [Escherichia coli],1D0L_A Chain A, 35KD SOLUBLE LYTIC TRANSGLYCOSYLASE [Escherichia coli],1D0M_A Chain A, 35KD SOLUBLE LYTIC TRANSGLYCOSYLASE [Escherichia coli],1QDR_A Chain A, LYTIC MUREIN TRANSGLYCOSYLASE B [Escherichia coli],1QDT_A Chain A, LYTIC MUREIN TRANSGLYCOSYLASE B [Escherichia coli],1QUS_A Chain A, LYTIC MUREIN TRANSGLYCOSYLASE B [Escherichia coli],1QUT_A Chain A, LYTIC MUREIN TRANSGLYCOSYLASE B [Escherichia coli]
1LTM_A 4.74e-186 40 355 1 318
AcceleratedX-ray Structure Elucidation Of A 36 Kda Muramidase/transglycosylase Using Warp [Escherichia coli]
5O8X_A 4.34e-88 51 355 1 303
TheX-ray Structure of Catenated Lytic Transglycosylase SltB1 from Pseudomonas aeruginosa [Pseudomonas aeruginosa],5O8X_B The X-ray Structure of Catenated Lytic Transglycosylase SltB1 from Pseudomonas aeruginosa [Pseudomonas aeruginosa]
4ANR_A 8.45e-87 54 355 21 320
Crystalstructure of soluble lytic Transglycosylase SltB1 from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1]
5ANZ_A 1.61e-27 94 350 86 342
CrystalStructure of SltB3 from Pseudomonas aeruginosa. [Pseudomonas aeruginosa],5AO7_A Crystal Structure of SltB3 from Pseudomonas aeruginosa in complex with NAG-anhNAM-pentapeptide [Pseudomonas aeruginosa]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P41052 8.07e-199 5 355 7 359
Membrane-bound lytic murein transglycosylase B OS=Escherichia coli (strain K12) OX=83333 GN=mltB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000053 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002889_03141.