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CAZyme Information: MGYG000002895_00618

You are here: Home > Sequence: MGYG000002895_00618

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lawsonella clevelandensis
Lineage Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Lawsonella; Lawsonella clevelandensis
CAZyme ID MGYG000002895_00618
CAZy Family CE1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
586 64253.92 10.1703
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002895 1578228 MAG United States North America
Gene Location Start: 4492;  End: 6252  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002895_00618.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE1 70 343 8.1e-52 0.9823788546255506

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG0627 FrmB 3.28e-52 69 350 46 316
S-formylglutathione hydrolase FrmB [Defense mechanisms].
pfam00756 Esterase 2.87e-33 70 340 1 244
Putative esterase. This family contains Esterase D. However it is not clear if all members of the family have the same function. This family is related to the pfam00135 family.
pfam08310 LGFP 4.91e-17 496 547 1 52
LGFP repeat. This 54 amino acid repeat is found in many hypothetical proteins. Several hypothetical proteins from C.glutamicum and C.efficiens along with PS1 protein contain this repeat region. The N-terminus region of PS1 contains an esterase domain which transfers corynomycolic acid. The C-terminus region consists of 4 tandem LGFP repeats. It is hypothesized that the PS1 proteins in Corynebacterium, when associated with the cell wall, may be anchored via the LGFP tandem repeats that may be important for maintaining cell wall integrity [Adindla et al. Comparative and Functional Genomics 2004; 5:2-16]. Deletion of Corynebacterium glutamicum csp1 protein results in a 10-fold increase in the cell volume of the organism and infers the corresponding proteins involvement in the cell shape formation. The secondary structure of each repeat is predicted to comprise two beta-strands and one alpha-helix [Adindla et al. 2004].
COG5479 Psp3 9.22e-14 458 575 126 244
Uncharacterized conserved protein, contains LGFP repeats [Function unknown].
pfam08310 LGFP 1.37e-11 444 489 1 48
LGFP repeat. This 54 amino acid repeat is found in many hypothetical proteins. Several hypothetical proteins from C.glutamicum and C.efficiens along with PS1 protein contain this repeat region. The N-terminus region of PS1 contains an esterase domain which transfers corynomycolic acid. The C-terminus region consists of 4 tandem LGFP repeats. It is hypothesized that the PS1 proteins in Corynebacterium, when associated with the cell wall, may be anchored via the LGFP tandem repeats that may be important for maintaining cell wall integrity [Adindla et al. Comparative and Functional Genomics 2004; 5:2-16]. Deletion of Corynebacterium glutamicum csp1 protein results in a 10-fold increase in the cell volume of the organism and infers the corresponding proteins involvement in the cell shape formation. The secondary structure of each repeat is predicted to comprise two beta-strands and one alpha-helix [Adindla et al. 2004].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VHO00488.1 0.0 1 586 1 586
ANI91040.1 1.64e-140 53 572 123 571
QGW23368.1 1.66e-135 53 576 95 546
AVZ38351.1 1.66e-135 53 576 95 546
AWH91115.1 2.20e-134 53 575 89 539

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6SX4_AAA 1.20e-104 44 580 40 506
ChainAAA, Protein PS1 [Corynebacterium glutamicum],6SX4_BBB Chain BBB, Protein PS1 [Corynebacterium glutamicum],6SX4_CCC Chain CCC, Protein PS1 [Corynebacterium glutamicum],6SX4_DDD Chain DDD, Protein PS1 [Corynebacterium glutamicum]
4MQL_A 6.68e-37 97 351 35 287
ChainA, Diacylglycerol acyltransferase/mycolyltransferase Ag85C [Mycobacterium tuberculosis]
1SFR_A 1.27e-36 96 347 35 284
ChainA, Antigen 85-A [Mycobacterium tuberculosis],1SFR_B Chain B, Antigen 85-A [Mycobacterium tuberculosis],1SFR_C Chain C, Antigen 85-A [Mycobacterium tuberculosis]
4QDX_A 2.23e-36 97 351 34 286
Crystalstructure of Antigen 85C-C209G mutant [Mycobacterium tuberculosis H37Rv]
4QDT_A 3.07e-36 97 351 34 286
Crystalstructure of Antigen 85C co-crystallized with iodoacetamide [Mycobacterium tuberculosis H37Rv]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C1D6 2.26e-108 44 580 83 549
Protein PS1 OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=csp1 PE=1 SV=1
P0C1D7 3.18e-108 44 580 83 549
Protein PS1 OS=Corynebacterium melassecola OX=41643 GN=csp1 PE=4 SV=1
O52956 3.98e-37 96 352 77 330
Diacylglycerol acyltransferase/mycolyltransferase Ag85A OS=Mycobacterium avium OX=1764 GN=fbpA PE=3 SV=1
Q49575 1.35e-36 96 352 74 328
Diacylglycerol acyltransferase/mycolyltransferase Ag85B OS=Mycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600) OX=487521 GN=fbpB PE=3 SV=2
Q06947 6.63e-36 96 352 74 327
Diacylglycerol acyltransferase/mycolyltransferase Ag85B OS=Mycobacterium avium OX=1764 GN=fbpB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.164746 0.833006 0.000877 0.000541 0.000394 0.000427

TMHMM  Annotations      download full data without filtering help

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