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CAZyme Information: MGYG000002897_00131
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Varibaculum cambriense | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Actinomycetaceae; Varibaculum; Varibaculum cambriense | |||||||||||
| CAZyme ID | MGYG000002897_00131 | |||||||||||
| CAZy Family | GT2 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 148227; End: 151664 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT2 | 14 | 229 | 1.2e-16 | 0.9217391304347826 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd04186 | GT_2_like_c | 1.14e-16 | 28 | 227 | 11 | 164 | Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. |
| COG1216 | GT2 | 1.77e-15 | 14 | 227 | 3 | 219 | Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism]. |
| pfam13641 | Glyco_tranf_2_3 | 1.90e-13 | 13 | 227 | 1 | 211 | Glycosyltransferase like family 2. Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis. |
| cd02526 | GT2_RfbF_like | 6.63e-09 | 27 | 227 | 8 | 203 | RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen. |
| pfam10101 | DUF2339 | 1.86e-06 | 560 | 899 | 75 | 381 | Predicted membrane protein (DUF2339). This domain, found in various hypothetical bacterial proteins, has no known function. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ACQ79467.1 | 3.00e-64 | 14 | 1144 | 13 | 1120 |
| QDB78491.1 | 5.42e-63 | 20 | 1144 | 17 | 1119 |
| QAY68885.1 | 1.20e-57 | 15 | 1142 | 53 | 1117 |
| QPK82176.1 | 3.70e-57 | 20 | 1144 | 1 | 1115 |
| ANC32825.1 | 4.13e-56 | 15 | 1144 | 36 | 1083 |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000067 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
TMHMM Annotations download full data without filtering help
| start | end |
|---|---|
| 382 | 404 |
| 494 | 516 |
| 555 | 572 |
| 577 | 599 |
| 604 | 623 |
| 628 | 650 |
| 687 | 709 |
| 722 | 744 |
| 778 | 800 |
| 805 | 827 |
| 837 | 859 |
| 868 | 890 |
| 1117 | 1139 |