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CAZyme Information: MGYG000002897_00491
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Varibaculum cambriense | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Actinomycetaceae; Varibaculum; Varibaculum cambriense | |||||||||||
| CAZyme ID | MGYG000002897_00491 | |||||||||||
| CAZy Family | CBM48 | |||||||||||
| CAZyme Description | 1,4-alpha-glucan branching enzyme GlgB | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 105301; End: 107484 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH13 | 274 | 573 | 6.8e-161 | 0.9933554817275747 |
| CBM48 | 123 | 212 | 4.9e-17 | 0.8947368421052632 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK05402 | PRK05402 | 0.0 | 8 | 725 | 1 | 724 | 1,4-alpha-glucan branching protein GlgB. |
| PRK14705 | PRK14705 | 0.0 | 5 | 726 | 500 | 1224 | glycogen branching enzyme; Provisional |
| PRK12313 | PRK12313 | 0.0 | 105 | 725 | 9 | 628 | 1,4-alpha-glucan branching protein GlgB. |
| PRK14706 | PRK14706 | 0.0 | 122 | 724 | 26 | 621 | glycogen branching enzyme; Provisional |
| COG0296 | GlgB | 0.0 | 98 | 724 | 1 | 628 | 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| VEI15775.1 | 0.0 | 5 | 727 | 20 | 744 |
| QLF53918.1 | 0.0 | 5 | 727 | 12 | 736 |
| QQQ58632.1 | 0.0 | 5 | 727 | 12 | 736 |
| QQC40175.1 | 0.0 | 5 | 727 | 12 | 736 |
| AMD99459.1 | 0.0 | 5 | 727 | 12 | 736 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3K1D_A | 1.02e-307 | 9 | 724 | 6 | 721 | Crystalstructure of glycogen branching enzyme synonym: 1,4-alpha-D-glucan:1,4-alpha-D-GLUCAN 6-glucosyl-transferase from mycobacterium tuberculosis H37RV [Mycobacterium tuberculosis H37Rv] |
| 5GR1_A | 6.36e-249 | 8 | 723 | 25 | 772 | Crystalstructure of branching enzyme Y500A/D501A mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142],5GR6_A Crystal structure of branching enzyme Y500A/D501A double mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142] |
| 5GR0_A | 9.01e-249 | 8 | 723 | 25 | 772 | Crystalstructure of branching enzyme D501A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142] |
| 5GQW_A | 1.28e-248 | 8 | 723 | 25 | 772 | Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142] |
| 5GR5_A | 3.63e-248 | 8 | 723 | 25 | 772 | Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q6AEU4 | 0.0 | 8 | 723 | 14 | 730 | 1,4-alpha-glucan branching enzyme GlgB OS=Leifsonia xyli subsp. xyli (strain CTCB07) OX=281090 GN=glgB PE=3 SV=1 |
| Q0SGR9 | 0.0 | 5 | 722 | 6 | 728 | 1,4-alpha-glucan branching enzyme GlgB OS=Rhodococcus jostii (strain RHA1) OX=101510 GN=glgB PE=3 SV=1 |
| Q8G5L0 | 2.34e-317 | 6 | 726 | 1 | 737 | 1,4-alpha-glucan branching enzyme GlgB OS=Bifidobacterium longum (strain NCC 2705) OX=206672 GN=glgB PE=3 SV=1 |
| Q2J6Q9 | 8.23e-317 | 11 | 724 | 94 | 811 | 1,4-alpha-glucan branching enzyme GlgB OS=Frankia casuarinae (strain DSM 45818 / CECT 9043 / CcI3) OX=106370 GN=glgB PE=3 SV=1 |
| Q47SE7 | 1.09e-313 | 19 | 722 | 40 | 744 | 1,4-alpha-glucan branching enzyme GlgB OS=Thermobifida fusca (strain YX) OX=269800 GN=glgB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000040 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |