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CAZyme Information: MGYG000002925_00028
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | CAG-877 sp900548695 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; RF39; UBA660; CAG-877; CAG-877 sp900548695 | |||||||||||
| CAZyme ID | MGYG000002925_00028 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | Cell division suppressor protein YneA | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 28409; End: 29281 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM50 | 144 | 186 | 1.8e-18 | 0.975 |
| CBM50 | 247 | 289 | 4e-17 | 0.975 |
| CBM50 | 93 | 135 | 1.2e-16 | 0.975 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK06347 | PRK06347 | 4.94e-50 | 85 | 288 | 325 | 591 | 1,4-beta-N-acetylmuramoylhydrolase. |
| PRK10783 | mltD | 2.18e-18 | 146 | 236 | 348 | 444 | membrane-bound lytic murein transglycosylase D; Provisional |
| PRK10783 | mltD | 2.43e-16 | 86 | 183 | 339 | 444 | membrane-bound lytic murein transglycosylase D; Provisional |
| pfam01476 | LysM | 1.96e-15 | 93 | 135 | 1 | 43 | LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known. |
| pfam01476 | LysM | 2.10e-14 | 146 | 186 | 3 | 43 | LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QOR66034.1 | 7.49e-38 | 51 | 246 | 40 | 256 |
| QVK20078.1 | 3.15e-35 | 9 | 187 | 112 | 285 |
| ACL69398.1 | 3.82e-33 | 76 | 246 | 130 | 310 |
| AGK52565.1 | 4.13e-32 | 92 | 239 | 107 | 261 |
| QOY35011.1 | 2.29e-30 | 31 | 246 | 102 | 316 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4B8V_A | 3.57e-16 | 80 | 240 | 32 | 218 | ChainA, Extracellular Protein 6 [Fulvia fulva],4B9H_A Chain A, Extracellular Protein 6 [Fulvia fulva] |
| 4UZ2_A | 1.34e-07 | 93 | 135 | 5 | 47 | Crystalstructure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_B Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_C Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_D Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ3_A Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8],4UZ3_B Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8],4UZ3_C Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8] |
| 4XCM_A | 1.07e-06 | 93 | 135 | 5 | 47 | Crystalstructure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4XCM_B Crystal structure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8] |
| 5YZ6_A | 3.35e-06 | 143 | 187 | 4 | 49 | Solutionstructure of LysM domain from a chitinase derived from Volvox carteri [Volvox carteri f. nagariensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O07532 | 2.86e-24 | 93 | 238 | 176 | 350 | Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2 |
| Q49UX4 | 1.87e-23 | 93 | 238 | 29 | 193 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=sle1 PE=3 SV=1 |
| O31852 | 1.36e-22 | 82 | 238 | 79 | 268 | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1 |
| P54421 | 3.16e-19 | 95 | 246 | 30 | 200 | Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1 |
| P37710 | 1.75e-17 | 30 | 238 | 498 | 736 | Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000056 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |