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CAZyme Information: MGYG000002933_02100
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phocaeicola sp900540105 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900540105 | |||||||||||
| CAZyme ID | MGYG000002933_02100 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 17683; End: 19086 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 51 | 401 | 1.1e-68 | 0.9323076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 7.84e-60 | 23 | 307 | 79 | 390 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN02218 | PLN02218 | 9.64e-24 | 28 | 313 | 69 | 343 | polygalacturonase ADPG |
| PLN02188 | PLN02188 | 1.53e-23 | 5 | 377 | 4 | 354 | polygalacturonase/glycoside hydrolase family protein |
| PLN03010 | PLN03010 | 2.33e-22 | 27 | 310 | 47 | 305 | polygalacturonase |
| PLN03003 | PLN03003 | 4.08e-21 | 8 | 301 | 12 | 275 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADY36938.1 | 7.24e-265 | 2 | 467 | 6 | 471 |
| ALJ60362.1 | 7.76e-236 | 1 | 455 | 1 | 457 |
| QEW34965.1 | 1.14e-235 | 11 | 465 | 13 | 467 |
| QUT59987.1 | 1.62e-235 | 11 | 465 | 13 | 467 |
| QQY41946.1 | 1.62e-235 | 11 | 465 | 13 | 467 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5OLP_A | 3.39e-21 | 27 | 270 | 45 | 312 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 3JUR_A | 4.93e-19 | 28 | 241 | 29 | 270 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 2UVE_A | 5.83e-15 | 26 | 234 | 156 | 405 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
| 4C2L_A | 2.89e-09 | 34 | 237 | 23 | 216 | Crystalstructure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
| 4MR0_A | 9.54e-08 | 23 | 196 | 112 | 281 | Crystalstructure of PfbA, a surface adhesin of Streptococcus pneumoniae [Streptococcus pneumoniae R6],4MR0_B Crystal structure of PfbA, a surface adhesin of Streptococcus pneumoniae [Streptococcus pneumoniae R6] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A7PZL3 | 2.59e-23 | 18 | 270 | 57 | 314 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| Q8RY29 | 1.20e-20 | 28 | 238 | 69 | 271 | Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2 |
| Q7M1E7 | 1.53e-18 | 20 | 236 | 52 | 260 | Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1 |
| Q9LW07 | 1.57e-18 | 24 | 238 | 21 | 217 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
| Q9FY19 | 6.38e-17 | 20 | 236 | 53 | 261 | Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000000 | 0.000051 | 0.999999 | 0.000000 | 0.000000 | 0.000000 |