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CAZyme Information: MGYG000002935_00952

You are here: Home > Sequence: MGYG000002935_00952

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp002161765
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp002161765
CAZyme ID MGYG000002935_00952
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
774 MGYG000002935_14|CGC1 85076.47 4.0229
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002935 2727252 MAG Finland Europe
Gene Location Start: 47630;  End: 49954  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 502 759 6e-43 0.6765676567656765

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 4.59e-27 502 758 54 263
Glycosyl hydrolase family 10.
pfam00331 Glyco_hydro_10 7.75e-26 502 760 96 310
Glycosyl hydrolase family 10.
COG3693 XynA 1.19e-18 491 764 117 343
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam00331 Glyco_hydro_10 1.19e-11 82 156 11 85
Glycosyl hydrolase family 10.
COG3693 XynA 5.04e-08 80 235 32 180
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRX63290.1 4.41e-278 21 764 3 731
ANU56191.1 2.26e-272 21 762 1 743
QQR18969.1 2.26e-272 21 762 1 743
ADD61487.1 4.05e-257 20 765 2 757
ADD61481.1 4.05e-257 20 765 2 757

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4MGS_A 2.36e-19 174 320 2 149
BiXyn10ACBM1 APO [Bacteroides intestinalis DSM 17393]
4QPW_A 2.27e-18 179 318 1 141
BiXyn10ACBM1 with Xylohexaose Bound [Bacteroides intestinalis DSM 17393]
6FHE_A 5.02e-12 495 755 115 335
Highlyactive enzymes by automated modular backbone assembly and sequence design [synthetic construct]
4XUY_A 6.36e-12 503 762 102 302
Crystalstructure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Aspergillus niger [Aspergillus niger CBS 513.88],4XUY_B Crystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Aspergillus niger [Aspergillus niger CBS 513.88]
4W8L_A 1.76e-11 503 755 106 338
Structureof GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4W8L_B Structure of GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4W8L_C Structure of GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q96VB6 4.27e-11 387 762 14 323
Endo-1,4-beta-xylanase F3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xynF3 PE=1 SV=1
A2QFV7 4.43e-11 503 762 127 327
Probable endo-1,4-beta-xylanase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=xlnC PE=1 SV=1
C5J411 5.92e-11 503 762 127 327
Probable endo-1,4-beta-xylanase C OS=Aspergillus niger OX=5061 GN=xlnC PE=2 SV=2
O59859 7.92e-11 503 762 127 327
Endo-1,4-beta-xylanase OS=Aspergillus aculeatus OX=5053 GN=xynIA PE=3 SV=1
P33559 1.41e-10 503 762 127 327
Endo-1,4-beta-xylanase A OS=Aspergillus kawachii (strain NBRC 4308) OX=1033177 GN=xynA PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.005422 0.182772 0.811669 0.000104 0.000032 0.000013

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002935_00952.