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CAZyme Information: MGYG000002935_01118

You are here: Home > Sequence: MGYG000002935_01118

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp002161765
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp002161765
CAZyme ID MGYG000002935_01118
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
533 MGYG000002935_19|CGC1 58309.75 4.2625
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002935 2727252 MAG Finland Europe
Gene Location Start: 11897;  End: 13498  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002935_01118.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 119 311 1.5e-80 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00656 Amb_all 9.15e-08 122 303 4 175
Amb_all domain.
COG3866 PelB 6.36e-05 79 369 48 335
Pectate lyase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY37155.1 0.0 1 532 1 530
QNL41084.1 2.04e-257 51 532 47 524
QUT78076.1 8.42e-255 51 532 47 526
QDM11673.1 8.42e-255 51 532 47 526
QRQ55767.1 1.97e-253 51 532 47 526

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 4.50e-54 64 530 18 418
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q5B297 4.72e-54 68 533 22 418
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
B0XMA2 4.71e-53 64 530 19 419
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 9.14e-53 64 530 19 419
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
Q2UB83 3.36e-52 64 530 18 418
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000122 0.039174 0.960587 0.000039 0.000053 0.000033

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002935_01118.