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CAZyme Information: MGYG000002935_01640

You are here: Home > Sequence: MGYG000002935_01640

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp002161765
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp002161765
CAZyme ID MGYG000002935_01640
CAZy Family GH8
CAZyme Description Reducing end xylose-releasing exo-oligoxylanase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
429 49142.36 6.0143
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002935 2727252 MAG Finland Europe
Gene Location Start: 23830;  End: 25119  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.156

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH8 99 416 1.7e-84 0.921875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3405 BcsZ 8.43e-52 45 427 1 354
Endo-1,4-beta-D-glucanase Y [Carbohydrate transport and metabolism].
pfam01270 Glyco_hydro_8 3.49e-25 105 412 34 314
Glycosyl hydrolases family 8.
PRK11097 PRK11097 8.45e-09 105 422 54 357
cellulase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT88744.1 8.92e-213 41 428 25 419
QDO68480.1 8.92e-213 41 428 25 419
ALJ60263.1 1.80e-212 41 428 25 419
EDV05843.1 1.04e-211 41 428 25 419
QUT46099.1 4.60e-201 41 429 418 813

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5YXT_A 1.86e-99 44 428 5 380
Glycosidehydrolase family 8 Xylanase [Paenibacillus barengoltzii G22],5YXT_B Glycoside hydrolase family 8 Xylanase [Paenibacillus barengoltzii G22],5YXT_C Glycoside hydrolase family 8 Xylanase [Paenibacillus barengoltzii G22],5YXT_D Glycoside hydrolase family 8 Xylanase [Paenibacillus barengoltzii G22]
1WU4_A 6.50e-98 43 428 5 383
ChainA, xylanase Y [Halalkalibacterium halodurans C-125],1WU5_A Chain A, xylanase Y [Halalkalibacterium halodurans C-125]
3A3V_A 2.59e-97 43 428 5 383
ChainA, Xylanase Y [Halalkalibacterium halodurans]
2DRR_A 3.66e-97 43 428 5 383
ChainA, Xylanase Y [Halalkalibacterium halodurans C-125]
1WU6_A 5.18e-97 43 428 5 383
ChainA, xylanase Y [Halalkalibacterium halodurans C-125]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9KB30 2.78e-97 43 428 5 383
Reducing end xylose-releasing exo-oligoxylanase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=BH2105 PE=1 SV=1
A0A0S2UQQ5 1.74e-93 44 423 6 379
Reducing-end xylose-releasing exo-oligoxylanase Rex8A OS=Paenibacillus barcinonensis OX=198119 GN=rex8A PE=1 SV=1
A1A048 1.79e-77 54 422 14 377
Reducing end xylose-releasing exo-oligoxylanase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=xylA PE=1 SV=1
P37701 4.74e-25 86 428 86 396
Endoglucanase 2 OS=Ruminiclostridium josui OX=1499 GN=celB PE=3 SV=1
P37699 1.00e-23 86 421 86 389
Endoglucanase C OS=Ruminiclostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) OX=394503 GN=celCCC PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002455 0.991852 0.004866 0.000328 0.000265 0.000219

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002935_01640.