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CAZyme Information: MGYG000002960_02014

You are here: Home > Sequence: MGYG000002960_02014

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900555035
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900555035
CAZyme ID MGYG000002960_02014
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
911 MGYG000002960_83|CGC1 99945.7 6.113
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002960 3004760 MAG China Asia
Gene Location Start: 3669;  End: 6404  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002960_02014.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 397 542 1.5e-20 0.7021276595744681

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13385 Laminin_G_3 2.03e-25 692 843 1 151
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
pfam14200 RicinB_lectin_2 6.07e-16 437 527 3 88
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 3.07e-13 489 544 1 58
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 1.75e-08 395 483 9 89
Ricin-type beta-trefoil lectin domain-like.
cd00161 RICIN 3.04e-06 407 540 8 124
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIM09902.1 1.80e-290 53 860 18 837
AGB29926.1 2.53e-228 4 908 5 899
QUT88791.1 1.46e-223 47 848 53 847
ALJ60208.1 4.62e-222 47 851 53 850
ASB47762.1 1.17e-217 4 843 2 835

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5HON_A 9.31e-06 645 842 1 201
Structureof Domain 4 of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinotriose [Geobacillus stearothermophilus],5HON_B Structure of Domain 4 of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinotriose [Geobacillus stearothermophilus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000246 0.999069 0.000173 0.000176 0.000161 0.000144

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002960_02014.