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CAZyme Information: MGYG000002982_00932

You are here: Home > Sequence: MGYG000002982_00932

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Streptococcus rubneri
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus rubneri
CAZyme ID MGYG000002982_00932
CAZy Family GT0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
583 68460.42 5.2907
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002982 1039311 MAG United States North America
Gene Location Start: 300;  End: 2051  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002982_00932.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3754 RgpF 0.0 1 582 1 595
Lipopolysaccharide biosynthesis protein [Cell wall/membrane/envelope biogenesis].
pfam05045 RgpF 0.0 34 512 1 500
Rhamnan synthesis protein F. This family consists of a group of proteins which are related to the Streptococcus rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O polysaccharides of phytopathogenic bacteria and are regarded as pathogenic factors.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QEW09567.1 0.0 1 577 1 577
SQH66670.1 0.0 1 578 1 578
SQF25488.1 0.0 1 578 1 578
QBS00304.1 0.0 1 578 1 578
ABJ66594.1 0.0 1 578 1 578

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P55470 7.70e-13 23 191 99 264
Uncharacterized protein y4gN OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a03500 PE=4 SV=1
B0RVK2 1.76e-12 287 506 449 659
Uncharacterized protein WxcX OS=Xanthomonas campestris pv. campestris (strain B100) OX=509169 GN=wxcX PE=4 SV=1
P0C7J1 5.35e-12 287 506 449 659
Uncharacterized protein WxcX OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=wxcX PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000054 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002982_00932.