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CAZyme Information: MGYG000002996_00686
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Desulfovibrio sp900546145 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Desulfobacterota; Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio; Desulfovibrio sp900546145 | |||||||||||
| CAZyme ID | MGYG000002996_00686 | |||||||||||
| CAZy Family | GT4 | |||||||||||
| CAZyme Description | Vitamin B12 import ATP-binding protein BtuD | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 79037; End: 81040 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd03255 | ABC_MJ0796_LolCDE_FtsE | 1.22e-90 | 5 | 219 | 1 | 218 | ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane. |
| COG1136 | LolD | 4.35e-90 | 4 | 217 | 1 | 218 | ABC-type lipoprotein export system, ATPase component [Cell wall/membrane/envelope biogenesis]. |
| NF038007 | ABC_ATP_DarD | 9.12e-63 | 20 | 219 | 20 | 218 | darobactin export ABC transporter ATP-binding protein. |
| COG1126 | GlnQ | 1.96e-58 | 3 | 222 | 1 | 217 | ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]. |
| cd03258 | ABC_MetN_methionine_transporter | 3.00e-58 | 4 | 220 | 1 | 220 | ATP-binding cassette domain of methionine transporter. MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AMD89422.1 | 7.90e-211 | 1 | 653 | 1 | 648 |
| SFV72712.1 | 1.48e-209 | 1 | 654 | 1 | 644 |
| VZH35395.1 | 5.14e-204 | 1 | 634 | 1 | 628 |
| ATD81516.1 | 5.03e-201 | 1 | 634 | 1 | 626 |
| SPD34221.1 | 5.03e-201 | 1 | 634 | 1 | 626 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5XU1_A | 1.92e-46 | 1 | 219 | 13 | 233 | Structureof a non-canonical ABC transporter from Streptococcus pneumoniae R6 [Streptococcus pneumoniae R6],5XU1_B Structure of a non-canonical ABC transporter from Streptococcus pneumoniae R6 [Streptococcus pneumoniae R6] |
| 5LJ9_A | 5.98e-44 | 1 | 224 | 1 | 226 | Structureof the E. coli MacB ABC domain (C2221) [Escherichia coli K-12],5LJ9_B Structure of the E. coli MacB ABC domain (C2221) [Escherichia coli K-12],5LJ9_C Structure of the E. coli MacB ABC domain (C2221) [Escherichia coli K-12],5LJA_A Structure of the E. coli MacB ABC domain (P6122) [Escherichia coli K-12] |
| 1L2T_A | 9.25e-44 | 21 | 217 | 21 | 221 | ChainA, Hypothetical ABC transporter ATP-binding protein MJ0796 [Methanocaldococcus jannaschii],1L2T_B Chain B, Hypothetical ABC transporter ATP-binding protein MJ0796 [Methanocaldococcus jannaschii] |
| 3TIF_A | 1.22e-42 | 21 | 217 | 21 | 221 | Dimericstructure of a post-hydrolysis state of the ATP-binding cassette MJ0796 bound to ADP and Pi [Methanocaldococcus jannaschii DSM 2661],3TIF_B Dimeric structure of a post-hydrolysis state of the ATP-binding cassette MJ0796 bound to ADP and Pi [Methanocaldococcus jannaschii DSM 2661] |
| 1F3O_A | 5.70e-41 | 21 | 217 | 21 | 221 | Crystalstructure of MJ0796 ATP-binding cassette [Methanocaldococcus jannaschii] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9WYI7 | 2.23e-50 | 1 | 217 | 1 | 219 | Uncharacterized ABC transporter ATP-binding protein TM_0352 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_0352 PE=3 SV=1 |
| O34979 | 1.90e-49 | 19 | 220 | 19 | 219 | Uncharacterized ABC transporter ATP-binding protein YvrO OS=Bacillus subtilis (strain 168) OX=224308 GN=yvrO PE=3 SV=2 |
| Q9A6Z7 | 6.83e-49 | 3 | 223 | 4 | 227 | Lipoprotein-releasing system ATP-binding protein LolD 2 OS=Caulobacter vibrioides (strain ATCC 19089 / CB15) OX=190650 GN=lolD2 PE=3 SV=1 |
| O31711 | 7.13e-48 | 20 | 220 | 20 | 219 | Uncharacterized ABC transporter ATP-binding protein YknY OS=Bacillus subtilis (strain 168) OX=224308 GN=yknY PE=1 SV=1 |
| A1K323 | 7.85e-46 | 20 | 220 | 38 | 237 | Macrolide export ATP-binding/permease protein MacB OS=Azoarcus sp. (strain BH72) OX=418699 GN=macB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000084 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |