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CAZyme Information: MGYG000003006_01010

You are here: Home > Sequence: MGYG000003006_01010

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900551365
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900551365
CAZyme ID MGYG000003006_01010
CAZy Family GH140
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
437 MGYG000003006_79|CGC1 49322.46 4.7441
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003006 1700612 MAG United States North America
Gene Location Start: 4806;  End: 6119  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003006_01010.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH140 18 389 6.8e-87 0.8616504854368932

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13204 DUF4038 6.67e-81 9 339 1 320
Protein of unknown function (DUF4038). A family of putative cellulases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54527.1 0.0 1 435 1 435
AZH70520.1 8.67e-312 1 436 1 436
QWT17210.1 3.31e-198 1 433 1 435
AEB07692.1 1.56e-192 1 435 1 456
QRT29801.1 4.18e-149 3 433 1 422

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MSY_A 1.96e-15 2 429 14 432
Glycosidehydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482],5MSY_B Glycoside hydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482],5MSY_C Glycoside hydrolase BT_1012 [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000038 0.000006 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003006_01010.