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CAZyme Information: MGYG000003016_00515

You are here: Home > Sequence: MGYG000003016_00515

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Salinicola tamaricis
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Halomonadaceae; Salinicola; Salinicola tamaricis
CAZyme ID MGYG000003016_00515
CAZy Family GT83
CAZyme Description Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
542 MGYG000003016_11|CGC1 60166.3 10.6481
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003016 3944563 MAG China Asia
Gene Location Start: 9526;  End: 11154  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003016_00515.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT83 22 496 1.6e-79 0.9148148148148149

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1807 ArnT 1.33e-21 23 321 12 320
4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis].
pfam13231 PMT_2 7.84e-10 74 199 1 127
Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.
PRK13279 arnT 1.73e-04 17 317 3 313
lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QXE90238.1 1.65e-88 23 497 14 496
QXM07636.1 1.65e-88 23 497 14 496
BBL59367.1 5.77e-88 25 497 13 497
QWV93130.1 6.46e-88 23 500 14 499
QXE86324.1 3.54e-87 23 497 14 496

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5EZM_A 6.46e-16 39 338 52 368
CrystalStructure of ArnT from Cupriavidus metallidurans in the apo state [Cupriavidus metallidurans CH34],5F15_A Crystal Structure of ArnT from Cupriavidus metallidurans bound to Undecaprenyl phosphate [Cupriavidus metallidurans CH34]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A6V1N8 4.97e-23 45 417 31 417
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pseudomonas aeruginosa (strain PA7) OX=381754 GN=arnT PE=3 SV=1
Q02R27 2.85e-21 45 417 31 417
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=arnT PE=3 SV=1
Q9HY61 3.80e-21 45 417 31 417
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=arnT PE=3 SV=1
B7VBN0 1.20e-20 45 417 31 417
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pseudomonas aeruginosa (strain LESB58) OX=557722 GN=arnT PE=3 SV=1
Q48HY9 2.66e-20 17 363 3 361
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) OX=264730 GN=arnT PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000024 0.000021 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
23 42
86 108
141 163
183 205
218 240
267 286
299 316
321 338
351 373
377 396
403 425