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CAZyme Information: MGYG000003042_01787

You are here: Home > Sequence: MGYG000003042_01787

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gemmiger sp900545545
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger sp900545545
CAZyme ID MGYG000003042_01787
CAZy Family GH8
CAZyme Description Reducing end xylose-releasing exo-oligoxylanase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
388 MGYG000003042_11|CGC2 44576.7 4.8321
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003042 2618954 MAG Netherlands Europe
Gene Location Start: 61527;  End: 62693  Strand: -

Full Sequence      Download help

MIMEGAYYSG  QYLNRLERLG  YAQAEIDNKL  ESTFEEMFYG  PEGVRLCHFA  GPDMMYIEDT60
GNHDVRTEGM  SYAMMFCVQM  NRQKEFDCLW  RWVVTHMYLT  EGENAGYFAW  SCHTDGSKNS120
DGPAPDGEEF  FAMSLFFAAN  RWGSGEGVLD  YASWARRILH  TCVHKGEEAG  SGFPMWNPEN180
HLIKFVPNCE  FTDPSYHLPH  FYELFALWSD  ECDRPFWHAA  AAASRQYLRK  ACHARTGLSA240
EYAEYDGRPH  RGDQPDRHDW  FFSDAYRTLG  NIALDAQWFG  DKDGWAQETA  AHIQQFFEEK300
EHGQTNGIYL  IDGTPVEGNA  LHPVGLLATI  AQGSLILDDA  CADEWLRRFF  STPLRSGPRR360
YYDNCLYLFA  LLALSGHYRI  WFPQEATV388

Enzyme Prediction      help

EC 3.2.1.156 3.2.1.8

CAZyme Signature Domains help

Created with Snap193858779711613515517419421323225227129131032934936859373GH8
Family Start End Evalue family coverage
GH8 59 373 1.7e-83 0.928125

CDD Domains      download full data without filtering help

Created with Snap19385877971161351551741942132322522712913103293493685383BcsZ57376Glyco_hydro_859379PRK11097
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3405 BcsZ 2.25e-77 5 383 1 353
Endo-1,4-beta-D-glucanase Y [Carbohydrate transport and metabolism].
pfam01270 Glyco_hydro_8 2.79e-20 57 376 22 321
Glycosyl hydrolases family 8.
PRK11097 PRK11097 0.009 59 379 44 357
cellulase.

CAZyme Hits      help

Created with Snap19385877971161351551741942132322522712913103293493683381AEN96279.1|GH83381QNO17280.1|GH83381QNM03743.1|GH83381ABX43561.1|GH83381CBK91091.1|GH8
Hit ID E-Value Query Start Query End Hit Start Hit End
AEN96279.1 7.71e-175 3 381 1 380
QNO17280.1 1.76e-171 3 381 1 381
QNM03743.1 5.21e-171 3 381 1 380
ABX43561.1 2.89e-170 3 381 1 380
CBK91091.1 1.07e-167 3 381 1 380

PDB Hits      download full data without filtering help

Created with Snap193858779711613515517419421323225227129131032934936843845YXT_A43841WU4_A43843A3V_A43842DRR_A43842DRS_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5YXT_A 1.46e-157 4 384 5 379
Glycosidehydrolase family 8 Xylanase [Paenibacillus barengoltzii G22],5YXT_B Glycoside hydrolase family 8 Xylanase [Paenibacillus barengoltzii G22],5YXT_C Glycoside hydrolase family 8 Xylanase [Paenibacillus barengoltzii G22],5YXT_D Glycoside hydrolase family 8 Xylanase [Paenibacillus barengoltzii G22]
1WU4_A 3.44e-152 4 384 6 382
ChainA, xylanase Y [Halalkalibacterium halodurans C-125],1WU5_A Chain A, xylanase Y [Halalkalibacterium halodurans C-125]
3A3V_A 1.39e-151 4 384 6 382
ChainA, Xylanase Y [Halalkalibacterium halodurans]
2DRR_A 1.97e-151 4 384 6 382
ChainA, Xylanase Y [Halalkalibacterium halodurans C-125]
2DRS_A 2.79e-151 4 384 6 382
ChainA, Xylanase Y [Halalkalibacterium halodurans C-125]

Swiss-Prot Hits      download full data without filtering help

Created with Snap19385877971161351551741942132322522712913103293493684384sp|Q9KB30|REOX_ALKHC4381sp|A0A0S2UQQ5|REX8A_PAEBA20379sp|A1A048|REOX_BIFAA22378sp|P37701|GUN2_RUMJO62378sp|P37699|GUNC_RUMCH
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9KB30 1.43e-151 4 384 6 382
Reducing end xylose-releasing exo-oligoxylanase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=BH2105 PE=1 SV=1
A0A0S2UQQ5 8.94e-146 4 381 6 380
Reducing-end xylose-releasing exo-oligoxylanase Rex8A OS=Paenibacillus barcinonensis OX=198119 GN=rex8A PE=1 SV=1
A1A048 3.30e-138 20 379 20 377
Reducing end xylose-releasing exo-oligoxylanase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=xylA PE=1 SV=1
P37701 1.03e-21 22 378 55 389
Endoglucanase 2 OS=Ruminiclostridium josui OX=1499 GN=celB PE=3 SV=1
P37699 2.57e-21 62 378 93 389
Endoglucanase C OS=Ruminiclostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) OX=394503 GN=celCCC PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000039 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003042_01787.