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CAZyme Information: MGYG000003042_01789

You are here: Home > Sequence: MGYG000003042_01789

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gemmiger sp900545545
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger sp900545545
CAZyme ID MGYG000003042_01789
CAZy Family GH3
CAZyme Description Beta-hexosaminidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
717 MGYG000003042_11|CGC2 78793.1 5.0945
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003042 2618954 MAG Netherlands Europe
Gene Location Start: 64946;  End: 67099  Strand: +

Full Sequence      Download help

MKDRNQKLEQ  YRERARALVA  QMTLKEKVSQ  MLSWAPAIPR  LGIPAYNWWN  EGIHGVGRAG60
TATVFPQAIG  LAASFDEDLL  GQVGEAVGVE  ARGKYNMYRS  YQDRDIYKGL  TIWAPNVNIF120
RDPRWGRGHE  TYGEDPYLTS  RLGVRFVEGM  QGDDPDYLRA  AACAKHFAVH  SGPEDQRHYF180
DAKVSQQDLW  ETYLPAFRAL  VKEAGVEAVM  GAYNRTNGEP  CCGSKTLLVD  ILRGKWNFQG240
HVTSDCWAIK  DFHEGHMVTS  GPVDSVALAV  NNGCDLNCGD  LYAYLEEAVA  EGKVKEETID300
RSLVRLFTTR  MKLGMFDAEE  KVPYNKIGYD  AVDSREMQAL  NLEVAEKVLV  LLKNENHTLP360
LDKSKLHRVA  VVGPNADNRK  ALVGNYEGTA  SLYVTVLDGI  QEYLGEDVQV  RYSEGCHLYA420
DKIQGLAKSN  ELISEVRGVC  AECDVVICCL  GLDAGLEGEE  GDQGNQFASG  DKQSLSLPGN480
QESVLKACIE  SGKPVVVVVL  SGSALALGTA  QEGAAAVLQA  WYPGAQGGRA  VARALFGECN540
PQGKLPVTFY  HSDEDLPAFT  DYAMKGRTYR  YMEKEPLYPF  GYGLSYSHFT  FRDAKADASQ600
IGPDGVDVRV  TVVNDGQYRG  RETVEVYVKA  ERPGTPNAQL  KALAKVDLMP  GEEKCVTLHL660
PQCAFALCNE  EGISEVLPGE  YTVWVGGSQP  DARSILLTGQ  KPLNILLHQK  EKAVISD717

Enzyme Prediction      help

EC 3.2.1.37 3.2.1.- 3.2.1.21 3.2.1.55

CAZyme Signature Domains help

Created with Snap357110714317921525028632235839443046650153757360964568137278GH3
Family Start End Evalue family coverage
GH3 37 278 8.6e-74 0.9814814814814815

CDD Domains      download full data without filtering help

Created with Snap357110714317921525028632235839443046650153757360964568114686PLN0308018686PRK1509830380BglX349586Glyco_hydro_3_C40308Glyco_hydro_3
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN03080 PLN03080 2.43e-159 14 686 52 769
Probable beta-xylosidase; Provisional
PRK15098 PRK15098 3.54e-135 18 686 41 751
beta-glucosidase BglX.
COG1472 BglX 1.32e-78 30 380 47 368
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915 Glyco_hydro_3_C 3.20e-64 349 586 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933 Glyco_hydro_3 6.92e-57 40 308 63 315
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Created with Snap357110714317921525028632235839443046650153757360964568110709CCG34879.1|GH37702BCJ97911.1|GH36711BCJ94359.1|GH311715QHQ61918.1|GH311707ADX05682.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
CCG34879.1 0.0 10 709 12 710
BCJ97911.1 0.0 7 702 10 705
BCJ94359.1 0.0 6 711 9 714
QHQ61918.1 0.0 11 715 13 719
ADX05682.1 0.0 11 707 13 707

PDB Hits      download full data without filtering help

Created with Snap3571107143179215250286322358394430466501537573609645681147007VC7_A147007VC6_A406955Z87_A406976R5I_A406976R5O_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7VC7_A 1.00e-112 14 700 25 732
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
7VC6_A 1.00e-112 14 700 25 732
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
5Z87_A 6.34e-103 40 695 120 777
ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]
6R5I_A 1.53e-92 40 697 69 732
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A 8.11e-92 40 697 69 732
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Created with Snap357110714317921525028632235839443046650153757360964568112691sp|D5EY15|XYL3A_PRER214689sp|Q9SGZ5|BXL7_ARATH13686sp|Q94KD8|BXL2_ARATH11688sp|Q9LJN4|BXL5_ARATH14686sp|Q9FGY1|BXL1_ARATH
Hit ID E-Value Query Start Query End Hit Start Hit End Description
D5EY15 1.21e-159 12 691 32 851
Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1
Q9SGZ5 6.02e-140 14 689 48 760
Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2
Q94KD8 1.76e-127 13 686 53 750
Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1
Q9LJN4 2.68e-126 11 688 48 760
Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana OX=3702 GN=BXL5 PE=2 SV=2
Q9FGY1 4.77e-125 14 686 59 762
Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000018 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003042_01789.