logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003042_02040

You are here: Home > Sequence: MGYG000003042_02040

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gemmiger sp900545545
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger sp900545545
CAZyme ID MGYG000003042_02040
CAZy Family GH3
CAZyme Description Thermostable beta-glucosidase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
745 MGYG000003042_17|CGC1 80734.48 4.6458
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003042 2618954 MAG Netherlands Europe
Gene Location Start: 9048;  End: 11285  Strand: -

Full Sequence      Download help

MVNLNELIQQ  LTLEEKAELL  TGGDFWHTRA  IERLEIPAIM  MSDGPSGLRK  QEKESDHLGI60
YGSTPAVCFP  SSAAVAASFD  TALAQKLGCV  VGNECQAEGV  ALLLGPGLNI  KRSPLCGRNF120
EYYSEDPVLA  GQMGAAMVEG  VQSTGTGSCI  KHFAANNQET  DRMVGDSVVD  ERTLHEIYLA180
PFETVVKEAK  PQAVMCAYNK  VNGTFCSENG  TLLTDILRSA  WGYQGMVVTD  WGAVKNRAVG240
VKAGLDLEMP  GGSRRGIQQV  LDAVVAGTLT  EAEVDRAAYN  VLKLVQTGIE  NHHPDAVFDR300
AADHDFARHI  AEECAVLLKN  KDSVLPLTEE  SSVALIGDFA  AAPRYQGGGS  SHVNSAYISR360
AVDCMPKGMS  WTRGYDQGSD  TSDRTLLEEA  VAAARKADAA  VILAGLPERY  ESEGVDRTTL420
EMPANQNELI  EAVSDVQPNT  IVVLYNGAPI  TMPWLDKVAA  VLEMYLPGDG  VGAATMDLLY480
GKANPSGKLP  ETFPQKLAHT  PSWFNFPGEN  GITEYREGVF  VGYRYYDAKE  MDVLFPFGYG540
LSYTSFAYSN  MTVDRSRMGE  GETLRVQLTV  INTGKLPGKE  VVQLYVAPPA  GMRRRPVREL600
KSFAKVALQP  GERREITFEL  NARDLAYYEP  LLHDFYTPTG  CYEIEVGASS  RDIRLRKEVS660
FTAERPLPRM  FTEYSTLADV  VSDPKGAAVF  GPILQRLAEA  AAGQASAGDT  EGASRMLEGM720
TLGTLVSFGV  LTEEQLKGML  EGLNG745

Enzyme Prediction      help

EC 3.2.1.21 3.2.1.37 3.2.1.23 3.2.1.-

CAZyme Signature Domains help

Created with Snap377411114918622326029833537240944748452155859663367070730250GH3
Family Start End Evalue family coverage
GH3 30 250 2.8e-69 0.9861111111111112

CDD Domains      download full data without filtering help

Created with Snap377411114918622326029833537240944748452155859663367070769662PRK1509823361BglX7618PLN03080315523Glyco_hydro_3_C69284Glyco_hydro_3
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 3.82e-87 69 662 120 763
beta-glucosidase BglX.
COG1472 BglX 7.29e-67 23 361 47 384
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PLN03080 PLN03080 8.20e-59 7 618 56 740
Probable beta-xylosidase; Provisional
pfam01915 Glyco_hydro_3_C 3.72e-53 315 523 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933 Glyco_hydro_3 3.79e-37 69 284 88 316
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Created with Snap37741111491862232602983353724094474845215585966336707072744AHF23779.1|GH32744AHF25574.1|GH32744AHF26358.1|GH33744AIQ24905.1|GH33744ACZ41103.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
AHF23779.1 3.70e-278 2 744 1 746
AHF25574.1 4.24e-272 2 744 1 746
AHF26358.1 1.59e-269 2 744 1 746
AIQ24905.1 2.65e-262 3 744 4 751
ACZ41103.1 1.11e-261 3 744 4 752

PDB Hits      download full data without filtering help

Created with Snap377411114918622326029833537240944748452155859663367070727447MS2_A86935WAB_A16652X40_A16652X42_A36673AC0_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7MS2_A 2.98e-255 2 744 3 752
ChainA, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2],7MS2_B Chain B, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2]
5WAB_A 1.08e-183 8 693 9 694
CrystalStructure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_B Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_C Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_D Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703]
2X40_A 1.93e-140 1 665 1 717
Structureof beta-glucosidase 3B from Thermotoga neapolitana in complex with glycerol [Thermotoga neapolitana DSM 4359],2X41_A Structure of beta-glucosidase 3B from Thermotoga neapolitana in complex with glucose [Thermotoga neapolitana DSM 4359]
2X42_A 2.99e-139 1 665 1 717
Structureof beta-glucosidase 3B from Thermotoga neapolitana in complex with alpha-D-glucose [Thermotoga neapolitana DSM 4359]
3AC0_A 3.02e-125 3 667 5 840
Crystalstructure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_B Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_C Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_D Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap37741111491862232602983353724094474845215585966336707072744sp|P14002|BGLB_ACET28705sp|F6C6C1|APY_BIFBA8705sp|E7CY69|APY_BIFLN2653sp|Q5BB53|BGLI_EMENI4654sp|P27034|BGLS_RHIRD
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P14002 1.63e-254 2 744 3 752
Thermostable beta-glucosidase B OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=bglB PE=1 SV=2
F6C6C1 7.10e-177 8 705 9 709
Exo-alpha-(1->6)-L-arabinopyranosidase OS=Bifidobacterium breve (strain ACS-071-V-Sch8b) OX=866777 GN=HMPREF9228_1477 PE=1 SV=1
E7CY69 1.59e-175 8 705 9 709
Exo-alpha-(1->6)-L-arabinopyranosidase OS=Bifidobacterium longum OX=216816 GN=apy PE=1 SV=1
Q5BB53 1.50e-141 2 653 4 823
Probable beta-glucosidase I OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=bglI PE=2 SV=2
P27034 3.65e-140 4 654 2 803
Beta-glucosidase OS=Rhizobium radiobacter OX=358 GN=cbg-1 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.987933 0.011680 0.000303 0.000032 0.000016 0.000044

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003042_02040.