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CAZyme Information: MGYG000003042_02200

You are here: Home > Sequence: MGYG000003042_02200

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gemmiger sp900545545
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger sp900545545
CAZyme ID MGYG000003042_02200
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
265 MGYG000003042_22|CGC1 28260.2 10.0487
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003042 2618954 MAG Netherlands Europe
Gene Location Start: 7886;  End: 8683  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003042_02200.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 15 170 1e-25 0.7872340425531915

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14200 RicinB_lectin_2 3.36e-24 51 138 2 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 1.59e-20 11 91 8 89
Ricin-type beta-trefoil lectin domain-like.
pfam00652 Ricin_B_lectin 6.61e-13 20 148 6 126
Ricin-type beta-trefoil lectin domain.
cd00161 RICIN 1.51e-12 17 150 2 124
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.
pfam14200 RicinB_lectin_2 1.85e-10 97 154 1 58
Ricin-type beta-trefoil lectin domain-like.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBL00367.1 2.21e-23 6 82 3 79
AXA82285.1 2.21e-23 6 82 3 79
QIA44072.1 8.29e-23 6 82 3 79
ATP00199.1 8.29e-23 6 82 3 79
ATL90382.1 8.29e-23 6 82 3 79

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000041 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003042_02200.