CAZyme Information: MGYG000003064_00644

Basic Information

• Species: Bacteroides graminisolvens
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides graminisolvens
• CAZyme ID: MGYG000003064_00644
• CAZy Family: PL1
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
550	MGYG000003064_2|CGC2	60281.23	7.7488

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003064	3410784	MAG	United States	North America

• Gene Location: Start: 223910; End: 225562 Strand: +

Full Sequence      

MLAAGIVPSVMAQYPVIPDSVKARGERQEAEIMRKSDAAWQKALPIILEEAAKGRFYKPW
ASKPDDLLKVDIPAFPGAEGGGAYTPGGRGGKVIVVTSLADEGPGTFREACETGGARIIV
FNVSGVIRLSSPIHLRAPYVTIAGQTAPGDGVCLTGASFLIDTHDVVIRHMRFRRGAQDV
AFRDDAIGGNPVGNIMIDHCSASWGLDENMSIYRHVYNRDETGHGLKLPTVNITIQNSVF
SEAMDTYNHAFGGTIGGHNCMFARNLFASNISRNCSVGMNEGFNFVNNVTFNWWNRSVDG
GDNTSLFNIINNYFKPGPITPLDKPISYRILKPESGRDKSKALSFGKAYVNGNIVHGNKK
VTKDNWNGGVQLADDVKEEEFLSKIRVNEPFPMPHVTIMPAQKAYNFVMENVGANFPKRD
AVDSRIVKSVQTGKAIYVENAPEFVSPYIKRRLPADSYKQGIITDIRQVGGLPEYKGTPV
KDSDNDGMPDAWEIKNGLNPHDPSDATLDCNGDGYTNIEKYINGIDTKKKVDWKDVKNNH
DTLAGRKSLL

Enzyme Prediction     

No EC number prediction in MGYG000003064_00644.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL1	124	314	2.5e-63	0.994535519125683

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
smart00656	Amb_all	1.08e-05	139	314	17	186	Amb_all domain.
COG3866	PelB	4.77e-04	73	314	29	273	Pectate lyase [Carbohydrate transport and metabolism].
pfam18884	TSP3_bac	0.006	482	503	1	22	Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT92144.1	0.0	1	550	12	560
QUT38452.1	0.0	1	549	12	559
BCA50117.1	0.0	1	549	12	559
QQA06585.1	0.0	1	549	12	559
ALJ62105.1	0.0	1	550	12	560

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
A1DPF0	1.80e-48	72	525	21	414	Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q4WL88	1.80e-48	72	525	21	414	Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B0XMA2	2.50e-48	72	525	21	414	Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
B8NQQ7	4.59e-46	72	525	20	413	Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q0CLG7	3.25e-45	74	525	22	413	Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.658621	0.340535	0.000203	0.000323	0.000176	0.000166

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003064_00644.