CAZyme Information: MGYG000003065_00788

Basic Information

• Species: Ruminococcus_B sp900544395
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Ruminococcus_B; Ruminococcus_B sp900544395
• CAZyme ID: MGYG000003065_00788
• CAZy Family: CBM32
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1940	MGYG000003065_7|CGC2	210062.13	4.3782

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003065	2628797	MAG	United States	North America

• Gene Location: Start: 25534; End: 31356 Strand: -

Full Sequence      

MKKKGKKSLALAMTLAVTVTSVPPVYAADTAHTPMILPELSDGENAKAVSWKYEKLDQAP
MKESVQASSENTPEQWNEGPAKLAFDGNNSTAWHTHYTYSGHEIPHWIQWDLGDTYDVGR
ISYTRKSDGATGTWKNIKVEATEDGTTWKTVCEKELPETAKGETTNIDFEPVKAKSLKVT
ISDVYATGDKFASAGEINVYKAIKDITLVDPIKVVSEKTTMKEGETQQLKYELTSEAQEV
GGEVKWSVTDNDVLKVDENGLVTAVGEGTESAVVEFRVGDTTYNNYVDITVEKVETECTI
NLNGTKYTANSLEEAVTKAGLTELTSVKFESGVIREEDFDFLKKFNRIQYTLKEFSIGDD
VVLRGLAGNKIPVNAFYKNTSGYALNTVYLGKNVKGLESQAFAYCKELTSFVAPGLESMH
ENALNRVNKLPELSLPSLKEVGAPLFGTMKNTVITKVSLPSATTLANDAFSKLTALTELE
LGATPPQVRISSKGLEFATGVVDNLKLVIPEGALDAYKASPGYNAETNTWYGIKLSEPQE
EVNINATINGTAVDGASLEKAVAASGVALEDIDSVTINSGKVTQEDLAYLKTIPRMETFE
MNVGENLQLIGKDGNPTTVLSKDTAVIEFAGKPSGSSKATMRTLTLGGITEIYYEGLKGY
ASIETINMPDVITVGERAFCLGEWVDTLDLSSAKTIGSNAFNGCKRLETLTMNAVETLGE
SSFKYTDALKELTLPETIKTIENIEFGIGGFKKSGVKIKILASTPPTVDRRAFDEVGSIS
RISTVTVPNGALAAYVAQVNPSADAAKVLKRQDIYWRNLYLREEGSSLIEYKAKCGTWAD
QYAYVTTGETISAEKMAALHKDDEKNLKENEEFKGWKIKETGEMLTAETVVSNDMTVSPV
IEEKAEEINVTATVNGGEVLGAESLEKVIEKASETVDSVTSLTVESGKVTADDQTFIETL
SNLETFELKKEAQLLDKEGNPTTVLDGEKIKLVFPGDVQTLTLGGITEIKKYGVKTKATT
INLPDVVTVGNGAFDSFGSLETLSLPKATTIGSNAFYKCRKLHSLTLESVVELGESSFYQ
TDALEKLTLPATIQKIANIKFGVCYSGNKEGAKITILAANPPEVASGAFKGVTSGSELYQ
MATVTVPAGSLAAYAAQVGGADVTKVVTKSDILWNNLYLREQGSNVIEYYYPGTGNNVHN
QYAYIPEGGTVGEEQIAEYNGKLEPGQEFKGWNTKEDGSGDMITAGYAITEETRVYPVIG
EKAEEVNITATVNGGEAIGAENLAKVIEKAGVDRVENLTIDSGKVTPEDLETLKGLRYLE
TLEMNLDGDLTLVNETGESTTVLPAGLFEKSKLESVSLAGFTEIGEKAFKDTNNLLSVNI
PNVTNIQSSAFLSTNLETIALPEVTTIGTSAFRGADELETVDMPKVETIGSEAFYGTAVA
EFTLPATITSIGSKAFEDVSDDLNITILTATPPEAKGAFGKGQITVPDGALQNYLPSLDL
SKPFWSTGDMKWNNLNVKDNAQRFITFKPNNGTADSSMYAYVVTGTAITEGRFPTTFENE
GKILSGWNTAEDGSGTAVDANTVVTEDMTLYAQWSDPVADLKVTASCSNDDGHGGAKWTN
EDVTVTLTANKAINDIEGWTRVSETELTKVHSENGTYQVTVTSADNQQAEVEYVVKHIDK
QAPDIRVEGTGNGEHYREITAIAVQDAKGVRYVTVNGVKTMVNAKDEKLTDIKALGVVEG
ENTAVVVDKAGNEKSITFYYDKTAPVIDYKAIEAANGYKREIPVNEGEEYTEKELVEMFT
KPGWVTDNSGHAEFKVDKWGLEHGLDGYKPFTSQTPGTYKVRFYAYDAAGNSSTFDVYVK
VLEAETPEERTTTVNYTVFLDNGVRTGTWTHTGTEEGTFEFEVSMTGLDLEGYVPAEGET
GSRTLTYGETTSVTFYLVSE

Enzyme Prediction     

No EC number prediction in MGYG000003065_00788.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM32	66	197	2.4e-22	0.9516129032258065

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13306	LRR_5	9.76e-30	1341	1458	1	122	Leucine rich repeats (6 copies). This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.
sd00036	LRR_3	2.89e-21	1362	1467	3	113	leucine-rich repeats. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.
sd00036	LRR_3	9.16e-21	1339	1456	1	125	leucine-rich repeats. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.
pfam00754	F5_F8_type_C	6.26e-19	64	197	1	127	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam13306	LRR_5	2.74e-17	1384	1467	1	86	Leucine rich repeats (6 copies). This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QHB24341.1	0.0	3	1937	2	1751
QEI31850.1	0.0	3	1937	2	1751
QRT30606.1	0.0	3	1937	2	1751
QHB23133.1	1.58e-96	1	1937	32	1718
QEI30621.1	1.58e-96	1	1937	32	1718

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4A41_A	2.70e-11	56	200	25	160	CpGH89CBM32-5,from Clostridium perfringens, in complex with galactose [Clostridium perfringens],4A44_A CpGH89CBM32-5, from Clostridium perfringens, in complex with the Tn Antigen [Clostridium perfringens],4A45_A CpGH89CBM32-5, from Clostridium perfringens, in complex with GalNAc- beta-1,3-galactose [Clostridium perfringens],4AAX_A CpGH89CBM32-5, from Clostridium perfringens, in complex with N- acetylgalactosamine [Clostridium perfringens]
2ZXQ_A	2.45e-06	68	197	1233	1369	Crystalstructure of endo-alpha-N-acetylgalactosaminidase from Bifidobacterium longum (EngBF) [Bifidobacterium longum]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000226	0.999076	0.000169	0.000175	0.000156	0.000135

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003065_00788.