CAZyme Information: MGYG000003065_02304

Basic Information

• Species: Ruminococcus_B sp900544395
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Ruminococcus_B; Ruminococcus_B sp900544395
• CAZyme ID: MGYG000003065_02304
• CAZy Family: GH98
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1357	MGYG000003065_51|CGC1	150756.68	4.6073

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003065	2628797	MAG	United States	North America

• Gene Location: Start: 4319; End: 8392 Strand: +

Full Sequence      

MKTRKEGSKARLLGLSCMALVLTAFGVTGIRTDAADAKKAPPLVNLAEEKDVKVTVGENM
NLKNEDLLTDGDKYYLQHDATGNKEGNNWENYQEQGTEVTSTAAGKNGVWVQVDLGASYP
LEVINLKRQVYDGQATIGNGNPGNQGKRLKGNKISYKNTAIVIGNEADLSDGQIVYCEGN
PTLPDGVKKPENVSKPYQEAMGGQWFYMDYENKNGLGATKLGTTKEARYIRVYTENPKGA
AVKFMELGIYGYENEQAVQSQEGPRRVIDNKHPMMIATAYSNDVYQIGQEKGPELQGSNT
VDGRWNAIPDDLKKNNVLLLHTNNLRQFAPDHIGQAYLQAFHEHGLQIAYEQGAPVMLLG
LTAAATPEQGGTQYNITADMDYGWLDLMYRMYPNMQGVFNTENFWAGIHPPCEGSAKMLE
IADRFGGFFVWSDQDHGSTVTNIVSNANMKKALEKHGDAFYLIYKNTSSNQPDDLKTSSF
FQGSWLAGYTGGWGMLSDTWAWDKQFSKLWEGKGNYNNWQRLCGEPEALLGMQMMSTYLG
GGVIYTFEFPEIVYGTSNTNSPANTHVLTELFRYIVNHPAPSKKEIMEETKAVLYGNVNP
SFYSGLSGTPTGFQIYETGRYGIIPVIPEWGSRAEVTKKLIQEADKLGVTPPNVLSVDDK
NLSGQTKQKYFKDLYPIEYVGNAFADKWDGTWYLYNNKVNTNNKQHAILPLEGEEESARL
KVEMEPHEFMIMNESGDGTAMDITLNNYRVDKDEIIFDNIYNLSWKGDFSPGQTTIDGKL
SVYKYMDDYNVVNAPEGKLSPADNELRTTTFELTKLAKEPKVQVVKGQQPDTDGQPQYTE
PKVEFNEETGKAVITIQTNGWVDLSITGLEFVYDENAQKIEDEPIKSERTNLARGKNVSF
SKDASDNSRKSHAVDGNKTNRDNYSDPGGNTGGANWLQVDLGGLHHVEEVNLYRYWDGNR
KYYDTVVLLSPDSSFDPTKTLVLWNGNRDADREWPASLSGAQGETHKLPKGEKEEYIETK
DGKNMKVYGADVSWLDPNTKTPLPEEGGRFDAGYIRVYMNGSTGGNTNHVVELEVMGETG
DVVIKDEEAPTVPGNLRVVSPKASEAEIRFLPSVDNTGVEKYKVSWSKGGEQVGFREVTQ
TALILDPLEAGSEYTVQVKAVDRYDNESEAAEVSFTAMDIQVSADVASGQYDSAQQVTLT
AGEGAEIYYTLDGSQPFEKNKEVSESAKKYEGPITVEKNTILRAAARKDGVEYGTGSWYY
LIGAQSQDNWETPKAPSDVRIDSKSSSSANISWAAEEPGCTYRVYANGKMVWEGKEMNQT
IQELTPLTTYQVYVTAVNERGIESLRSETVEFVTMAQ

Enzyme Prediction     

No EC number prediction in MGYG000003065_02304.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH98	265	580	5.1e-42	0.981651376146789

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam08307	Glyco_hydro_98C	8.19e-36	583	866	1	267	Glycosyl hydrolase family 98 C-terminal domain. This putative domain is found at the C-terminus of glycosyl hydrolase family 98 proteins. This domain is not expected to form part of the catalytic activity.
pfam08306	Glyco_hydro_98M	4.74e-32	265	580	8	328	Glycosyl hydrolase family 98. This domain is the putative catalytic domain of glycosyl hydrolase family 98 proteins.
pfam13290	CHB_HEX_C_1	2.41e-15	1187	1250	2	59	Chitobiase/beta-hexosaminidase C-terminal domain.
pfam13287	Fn3_assoc	1.23e-11	1197	1250	1	48	Fn3 associated.
cd00063	FN3	1.86e-07	1090	1176	1	92	Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRT30095.1	0.0	1	1357	1	1357
QHB23852.1	0.0	1	1357	10	1366
QEI31357.1	0.0	1	1357	10	1366
ASU31881.1	8.49e-91	265	866	381	967
QQQ95553.1	8.49e-91	265	866	381	967

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7Q20_A	0.0	39	884	1	846	ChainA, Ruminococcus gnavus endogalactosidase GH98 [[Ruminococcus] gnavus ATCC 29149],7Q20_G Chain G, Ruminococcus gnavus endogalactosidase GH98 [[Ruminococcus] gnavus ATCC 29149]
7PMO_D	0.0	39	887	1	849	ChainD, Ruminococcus gnavus endogalactosidase GH98 [[Ruminococcus] gnavus ATCC 29149],7PMO_G Chain G, Ruminococcus gnavus endogalactosidase GH98 [[Ruminococcus] gnavus ATCC 29149]
7Q1W_A	0.0	40	883	1	844	ChainA, Ruminococcus gnavus end galactosidase GH98 [[Ruminococcus] gnavus ATCC 29149]
2WMI_A	1.69e-84	260	866	23	604	Crystalstructure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae SP3-BS71 in complex with the A-trisaccharide blood group antigen. [Streptococcus pneumoniae SP3-BS71],2WMJ_A Crystal structure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae SP3-BS71 (Sp3GH98) in complex with the B-trisaccharide blood group antigen. [Streptococcus pneumoniae SP3-BS71],2WMJ_B Crystal structure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae SP3-BS71 (Sp3GH98) in complex with the B-trisaccharide blood group antigen. [Streptococcus pneumoniae SP3-BS71]
2WMI_B	2.32e-84	260	866	23	604	Crystalstructure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae SP3-BS71 in complex with the A-trisaccharide blood group antigen. [Streptococcus pneumoniae SP3-BS71]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q6RUF5	1.25e-90	265	866	221	797	Blood-group-substance endo-1,4-beta-galactosidase OS=Clostridium perfringens OX=1502 GN=eabC PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.035849	0.604581	0.351870	0.006379	0.000845	0.000452

TMHMM  Annotations     

start	end
12	30