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CAZyme Information: MGYG000003072_03059

You are here: Home > Sequence: MGYG000003072_03059

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paenibacillus amylolyticus
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus amylolyticus
CAZyme ID MGYG000003072_03059
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
495 MGYG000003072_12|CGC2 54039.6 4.6675
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003072 7042795 MAG China Asia
Gene Location Start: 40858;  End: 42345  Strand: +

Full Sequence      Download help

MIRVVILMIP  ILMVLVSGCQ  NHTSAMNEPV  SVQKSDPQVI  HYISPQGNDS  NKGTIQSPWK60
TLQHAADHAS  PGSTIYLREG  VYHQKVKITR  SGNSSANPTL  FSSYPQEQVI  IDGNGLSVRG120
IEGLIEIENA  SYITIQNLEI  RNFTTTLGGQ  VPTGIYVHGA  GEHIQLLGNT  IHAIASYATP180
EGSDLRGRDA  HGIAIYGTEH  PQALRDIIIK  DNELYDLTLG  SSESLAVNGN  VDTFAIQDNI240
IHDSDNIGID  LIGYEGTSED  DTYDQARNGI  VRGNEVYDIT  SNNNPSYGTD  LPNDTNSAGG300
IYVDGGKDHI  IDQNRVYRSD  IGIEIASEHA  GRSTSNITVR  DNLIYSNRLT  GIAMGGYDEE360
RGATEDSKIM  YNTLVGNDTL  NAGNGQLFMQ  SRTKNNTFMR  NILVSGSSEV  LIYNEYTSNT420
GNVFDHNVYY  SPGEQQDALW  VWKNKAYSGI  AAYIKGSGND  AHSIYVNPAF  MDEPSEDFRP480
QANSPAKAYG  YLAPR495

Enzyme Prediction      help

No EC number prediction in MGYG000003072_03059.

CAZyme Signature Domains help

Created with Snap2449749912314817319822224727229732134637139642044547041412PL9
Family Start End Evalue family coverage
PL9 41 412 1.3e-140 0.9809782608695652

CDD Domains      download full data without filtering help

Created with Snap24497499123148173198222247272297321346371396420445470268436NosD296430Beta_helix
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05048 NosD 1.15e-04 268 436 14 187
Periplasmic copper-binding protein (NosD). NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme (NosZ). This region forms a parallel beta helix domain.
pfam13229 Beta_helix 0.002 296 430 21 140
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Created with Snap244974991231481731982222472722973213463713964204454701495APO47099.1|PL9_21495QZN75626.1|PL9_21495QLG39102.1|PL9_211494QOS80477.1|PL9_235495QKS60057.1|PL9_2
Hit ID E-Value Query Start Query End Hit Start Hit End
APO47099.1 0.0 1 495 1 495
QZN75626.1 0.0 1 495 1 495
QLG39102.1 1.55e-284 1 495 1 496
QOS80477.1 2.66e-283 11 494 13 496
QKS60057.1 3.04e-242 35 495 7 467

PDB Hits      download full data without filtering help

Created with Snap24497499123148173198222247272297321346371396420445470411143VST_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3VST_A 1.28e-06 41 114 3 76
Thecomplex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VST_B The complex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VST_C The complex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VST_D The complex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_A The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_B The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_C The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_D The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_A The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_B The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_C The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_D The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485]

Swiss-Prot Hits      download full data without filtering help

Created with Snap2449749912314817319822224727229732134637139642044547042487sp|P94576|YWOF_BACSU
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P94576 5.78e-100 42 487 37 464
Uncharacterized protein YwoF OS=Bacillus subtilis (strain 168) OX=224308 GN=ywoF PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000058 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003072_03059.