logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003072_04781

You are here: Home > Sequence: MGYG000003072_04781

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paenibacillus amylolyticus
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus amylolyticus
CAZyme ID MGYG000003072_04781
CAZy Family GH3
CAZyme Description Beta-glucosidase BoGH3B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
770 MGYG000003072_25|CGC2 84615.42 4.7242
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003072 7042795 MAG China Asia
Gene Location Start: 38201;  End: 40513  Strand: -

Full Sequence      Download help

MDYKDASLPI  QERVQDLIGR  MTTAEKIGQL  IQPMGWKTYD  KAADGTVQVT  EEFKADMEQG60
GVGSLYGVLR  ADPWTEVTLE  TGLTPRQGAV  ATNVIQQYAM  EHSRLGIPIL  FGEECSHGHM120
AIGATVFPVP  LMVGSTWNME  LYRKMCEAIA  VETRSQGGAA  TYSPVLDVVR  DPRWGRTEEC180
FAEDPYLIGE  FAVEAMKGLQ  GDRLDSNQTI  VATLKHFAAY  GSSEGGRNAA  PVHMGLRELH240
EIDLLPFKKA  VEAGACSVMT  AYNEIDGVPC  TSSTYLLNDL  LREQWGFEGF  VITDFGAIQM300
LVHGHNTAEN  GEQAVAQSLQ  AGVDMEMSGY  MYRKHLGQAL  EQGLIKEKDL  DLAVWRVLEM360
KFRLGLFEKP  FVDPEFAERV  IGCEDHIQLA  REVAQEGIVL  LKNEGNTLPL  AKTGTMLAVI420
GPNANHIYNQ  LGDYTSPQPR  EQIVTVLDGI  TRKLGVDSGQ  VLYAPGCRIK  GDSREGFAQA480
LACAEQADVI  VMVMGGSSAR  DFGEGTIDLR  TGASVVTDDP  WNDMECGEGI  DRASLNLMGV540
QLELVQEVHK  LGKPVIVVYI  NGRPIAEPWI  DEHVHAIVEA  WYPGQEGGNA  IADILFGDVN600
PSGRLTVSIP  KHVGQLPVYY  HAKRTRGKRY  LEMDLAPQYP  FGYGLSYTEF  KYENVRVMPE660
IIGPDDEAQV  MVEVTNTGAV  AGSEVVQLYI  TDVSASVTRA  EMSLKGFRKI  HLKPGQTQTV720
TFPVQKEHLA  LIDSRLQSVV  EPGEFRLMVG  RNSMDWTACS  LHIQKVGVEV  770

Enzyme Prediction      help

No EC number prediction in MGYG000003072_04781.

CAZyme Signature Domains help

Created with Snap3877115154192231269308346385423462500539577616654693731100327GH3
Family Start End Evalue family coverage
GH3 100 327 1.3e-72 0.9861111111111112

CDD Domains      download full data without filtering help

Created with Snap38771151541922312693083463854234625005395776166546937316755PRK1509821452BglX5750PLN0308022360Glyco_hydro_3398647Glyco_hydro_3_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 0.0 6 755 27 756
beta-glucosidase BglX.
COG1472 BglX 8.88e-99 21 452 1 393
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PLN03080 PLN03080 2.14e-93 5 750 44 769
Probable beta-xylosidase; Provisional
pfam00933 Glyco_hydro_3 9.32e-80 22 360 1 316
Glycosyl hydrolase family 3 N terminal domain.
pfam01915 Glyco_hydro_3_C 3.78e-77 398 647 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits      help

Created with Snap38771151541922312693083463854234625005395776166546937311770QZN77313.1|GH31770APO43401.1|GH31769QOS82159.1|GH31770QLG37400.1|GH31770QKS60225.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
QZN77313.1 0.0 1 770 1 770
APO43401.1 0.0 1 770 1 770
QOS82159.1 0.0 1 769 1 769
QLG37400.1 0.0 1 770 1 770
QKS60225.1 0.0 1 770 1 770

PDB Hits      download full data without filtering help

Created with Snap387711515419223126930834638542346250053957761665469373127555Z87_A147555XXL_A147555XXN_A147535TF0_A37555YOT_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5Z87_A 3.21e-158 2 755 35 776
ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]
5XXL_A 3.26e-154 14 755 14 743
Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]
5XXN_A 1.81e-153 14 755 14 743
CrystalStructure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXN_B Crystal Structure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXO_A Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482],5XXO_B Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482]
5TF0_A 1.46e-149 14 753 13 740
CrystalStructure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393]
5YOT_A 2.90e-146 3 755 7 747
Isoprimeverose-producingenzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YOT_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_A Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40]

Swiss-Prot Hits      download full data without filtering help

Created with Snap387711515419223126930834638542346250053957761665469373197753sp|T2KMH0|PLH24_FORAG14753sp|Q56078|BGLX_SALTY14753sp|P33363|BGLX_ECOLI2765sp|T2KMH9|PLH34_FORAG10755sp|A7LXU3|BGH3B_BACO1
Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KMH0 4.99e-149 97 753 55 710
Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
Q56078 3.15e-145 14 753 38 754
Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
P33363 1.74e-144 14 753 38 754
Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
T2KMH9 3.50e-129 2 765 28 756
Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1
A7LXU3 3.67e-101 10 755 35 767
Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000075 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003072_04781.