logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003079_00168

You are here: Home > Sequence: MGYG000003079_00168

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900539035
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900539035
CAZyme ID MGYG000003079_00168
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
514 53926.56 6.7123
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003079 2130759 MAG Spain Europe
Gene Location Start: 188879;  End: 190423  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003079_00168.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 237 387 8.4e-25 0.9921875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00877 NLPC_P60 9.98e-27 417 497 1 86
NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.
COG0791 Spr 1.17e-24 400 496 70 175
Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis].
COG1705 FlgJ 4.55e-22 236 408 49 200
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].
NF033741 NlpC_p60_RipA 2.29e-19 412 497 335 436
NlpC/P60 family peptidoglycan endopeptidase RipA.
NF038016 sporang_Gsm 3.58e-19 238 391 168 312
sporangiospore maturation cell wall hydrolase GsmA. The peptidoglycan-hydrolyzing enzyme GsmA occurs in some sporangia-forming members of the Actinobacteria, such as Actinoplanes missouriensis, and is required for proper separation of spores. GsmA proteins have one or two SH3 domains N-terminal to the hydrolase domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AJC12020.1 0.0 1 514 15 528
AWG17013.1 3.18e-306 1 514 15 528
AZR04005.1 3.18e-306 1 514 15 528
AWG04286.1 3.18e-306 1 514 15 528
AZR06479.1 2.60e-305 1 514 15 528

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6B8C_A 4.31e-18 404 502 27 130
Crystalstructure of NlpC/p60 domain of peptidoglycan hydrolase SagA [Enterococcus faecium]
4HPE_A 3.34e-14 405 490 187 281
ChainA, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_B Chain B, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_C Chain C, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_D Chain D, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_E Chain E, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_F Chain F, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630]
2XIV_A 4.00e-13 402 495 77 186
Structureof Rv1477, hypothetical invasion protein of Mycobacterium tuberculosis [Mycobacterium tuberculosis H37Rv]
3PBC_A 4.37e-13 402 495 82 191
ChainA, Invasion Protein [Mycobacterium tuberculosis]
3NE0_A 4.37e-13 402 495 82 191
Structureand functional regulation of RipA, a mycobacterial enzyme essential for daughter cell separation [Mycobacterium tuberculosis H37Rv]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P13692 1.46e-14 404 508 401 509
Protein P54 OS=Enterococcus faecium OX=1352 PE=3 SV=2
P9WHU2 1.46e-13 408 495 276 365
Probable endopeptidase MT2245 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2245 PE=3 SV=1
P67474 1.46e-13 408 495 276 365
Probable endopeptidase Mb2213c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB2213C PE=3 SV=1
P9WHU3 1.46e-13 408 495 276 365
Probable endopeptidase Rv2190c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2190c PE=3 SV=1
A0QX22 5.54e-13 408 496 371 475
Peptidoglycan endopeptidase RipA OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=ripA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000048 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
168 190
195 217